Job Description P25740 Confidence 99.97% Date Thu Jan 5 11:42:26 GMT 2012 Rank 22 Aligned Residues 353 % Identity 12% Template c3ot5D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.2 angstrom resolution crystal structure of putative udp-n-2 acetylglucosamine 2-epimerase from listeria monocytogenes Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		M	I	V	A	F	C	L	Y	K	Y	F	P	F	G	G	L	Q	R	D	F	M	R	I	A	S	T	V	A	A	R	G	H	H	V	R	V	Y	T	Q	S	W	E	G	D	C	P	.	.	.	.	K	A	F	E	L	I	Q	V	P	V	K	S	H	T	N	H	G	R	N	A	E	Y	Y	A	W	V	Q	N	H	L
Query Conservation																																																.	.	.	.
Alig confidence											.	.	.	.																																		.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		I	K	V	M	S	I	F	G	T	.	.	.	.	R	P	E	A	I	K	M	A	P	L	V	L	A	L	E	K	E	P	E	T	F	E	S	T	V	V	I	T	A	M	L	D	Q	V	L	E	I	F	D	I	K	P	D	I	D	L	D	I	G	Q	T	L	A	E	I	T	S	R	V	M	N	G	I	N	E	V	I
Template Known Secondary structure										S	.	.	.	.																T		T	T	T																		T	T				S
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		K	E	H	P	A	D	R	V	V	G	F	.	N	K	M	P	G	L	D	V	Y	F	A	A	D	V	C	Y	A	E	K	V	A	Q	E	K	G	F	L	Y	R	L	T	S	R	Y	R	H	Y	A	A	F	E	R	A	T	F	E	Q	G	K	S	T	K	L	M	M	L	T	D	K	Q	I	A	D	F	Q	K	H	Y
Query Conservation													.
Alig confidence													.																												.	.																																							.
Template Conservation																																									.	.																																							.
Template Sequence		A	A	E	N	P	D	I	V	L	V	H	G	D	T	T	T	S	F	A	A	G	L	A	T	F	Y	Q	Q	K	M	L	G	H	V	E	A	G	L	R	.	.	T	W	N	K	Y	S	P	F	P	E	E	M	N	R	Q	L	T	G	V	M	A	D	I	H	F	S	P	T	K	Q	A	K	E	N	L	L	A	E	.
Template Known Secondary structure							S						T	T														T	T							S					.	.		S		T	T	T	T	T	T													S					S	S										T	.
Template Predicted Secondary structure																																									.	.																																							.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	E	P	E	R	F	Q	I	L	P	P	G	I	Y	P	D	R	K	Y	S	E	Q	I	P	N	S	R	E	I	Y	R	Q	K	N	G	I	K	E	Q	Q	N	L	L	L	Q	V	G	S	D	F	G	R	K	G	V	D	R	S	I	E	A	L	A	S	L	P	E	S	L	R	H	N	T	L	L	F	V	V	G
Query Conservation
Alig confidence																										.	.
Template Conservation																										.	.
Template Sequence		G	K	D	P	A	T	I	F	V	T	G	N	T	A	I	D	A	L	K	T	T	V	Q	K	.	.	D	Y	H	H	P	I	L	E	N	L	G	D	N	R	L	I	L	M	T	A	H	R	R	E	N	L	G	E	P	M	Q	G	M	F	E	A	V	R	E	I	V	E	S	R	E	D	T	E	L	V	Y	P	M	H
Template Known Secondary structure		T			G	G	G											T					S		T	.	.	T								S		T	T															S	T																	T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		236	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		Q	D	K	P	R	.	K	F	E	A	L	A	E	K	L	G	V	R	S	N	V	H	F	F	S	G	R	N	D	V	S	E	L	M	A	A	A	D	L	L	L	H	P	A	Y	Q	E	A	A	G	I	V	L	L	E	A	I	T	A	G	L	P	V	L	T	T	A	V	C	G	Y	A	H	Y	I	A	D	A	N	C
Query Conservation							.
Alig confidence							.																																							.	.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		L	N	P	A	V	R	E	K	A	M	A	I	L	G	G	H	E	R	I	H	L	I	E	P	L	D	A	I	D	F	H	N	F	L	R	K	S	Y	L	V	F	T	D	S	.	.	.	.	.	G	G	V	Q	E	E	A	P	G	M	G	V	P	V	L	V	L	R	D	T	T	E	R	P	E	G	I	E	A	G	T
Template Known Secondary structure		S													T	T		T	T																											.	.	.	.	.							G	G	G	G	T								S	S		S							T	T	S
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.						.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	V	I	A	E	P	F	S	Q	E	Q	L	N	E	V	L	R	K	A	L	T	Q	S	P	L	R	M	A	W	A	E	N	A	R	H	Y	A	D	T	Q	D	L	Y	S	L	P	E	K	A	A	D	I	I	T
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		L	K	L	I	.	.	G	T	N	K	E	N	L	I	K	E	A	L	D	L	L	D	N	K	E	S	H	D	K	M	A	Q	A	A	N	P	Y	G	D	G	F	A	A	N	R	I	L	A	A	I	K	S	H	F	E
Template Known Secondary structure						.	.		S																									S			T	T			S
Template Predicted Secondary structure						.	.
Template SS confidence
		317	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions