Job Description P25740 Confidence 100.00% Date Thu Jan 5 11:42:26 GMT 2012 Rank 8 Aligned Residues 363 % Identity 19% Template c3okaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:gdp-mannose-dependent alpha-(1-6)-phosphatidylinositol PDBTitle: crystal structure of corynebacterium glutamicum pimb' in complex with2 gdp-man (triclinic crystal form) Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																																			.
Query SS confidence													.																																			.
Query Sequence		I	V	A	F	C	L	Y	K	Y	F	P	.	F	G	G	L	Q	R	D	F	M	R	I	A	S	T	V	A	A	R	G	H	H	V	R	V	Y	T	Q	S	W	E	G	D	C	P	.	K	A	F	E	L	I	Q	V	P	V	K	S	H	T	N	H	G	R	N	A	E	Y	Y	A	W	V	Q	N	H	L	K	E	H
Query Conservation													.																																			.
Alig confidence													.																																			.
Template Conservation
Template Sequence		K	T	L	V	V	T	N	D	F	P	P	R	I	G	G	I	Q	S	Y	L	R	D	F	I	A	T	Q	D	P	E	S	I	V	V	F	A	S	T	Q	N	A	E	E	A	H	A	Y	D	K	T	L	D	Y	E	V	I	R	W	P	R	S	V	M	L	P	T	P	T	T	A	H	A	M	A	E	I	I	R	E	R
Template Known Secondary structure								S			T	T	S		S												T	S		G	G	G								S										T	T		S	S						S	S	S	S																		T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	D	R	V	V	G	F	N	K	M	P	G	L	D	V	Y	F	A	A	D	V	C	Y	A	E	K	V	A	Q	E	K	G	F	L	Y	R	L	T	S	R	Y	R	H	Y	A	A	F	E	R	A	T	F	E	Q	G	K	S	T	K	L	M	M	L	T	D	K	Q	I	A	D	F	Q	K	H	Y	Q	T	E	P
Query Conservation
Alig confidence																																																							.	.
Template Conservation																																																							.	.
Template Sequence		E	I	D	N	V	W	F	G	A	A	A	P	L	A	L	M	A	G	T	A	K	Q	A	G	A	S	K	V	I	A	S	T	H	G	H	E	V	G	W	S	M	L	P	G	S	R	Q	S	L	R	K	I	G	.	.	T	E	V	D	V	L	T	Y	I	S	Q	Y	T	L	R	R	F	K	S	A	F	G	S	H	P
Template Known Secondary structure		T		S					S	S		T	T	G	G	G	G							T	T		S								S		S	S	S	T	T			T	T										.	.				S					S									T	T	T	T		S	S	S
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	F	Q	I	L	P	P	G	I	Y	P	D	R	K	Y	S	E	Q	I	P	N	S	R	E	I	Y	R	Q	K	N	G	I	K	E	Q	Q	N	L	L	L	Q	V	G	S	D	F	G	R	K	G	V	D	R	S	I	E	A	L	A	S	L	P	E	S	L	R	H	N	T	L	L	F	V	V	G	Q	D	K	P
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		T	.	.	F	E	H	L	P	S	G	V	D	V	K	R	F	T	P	A	T	P	E	D	K	S	A	T	R	K	K	L	G	F	T	D	T	T	P	V	I	A	C	N	S	R	L	V	P	R	K	G	Q	D	S	L	I	K	A	M	P	Q	V	I	A	A	R	P	D	A	Q	L	L	I	V	G	S	G	R	Y	E
Template Known Secondary structure			.	.								B		T	T	T	S																T			T	T								S		S	S	G	G	G																	T	T										T	T
Template Predicted Secondary structure			.	.
Template SS confidence
		164			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.								.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.
Query Sequence		R	K	F	E	A	L	A	E	K	L	G	V	R	S	N	V	H	F	F	S	G	R	N	D	V	S	E	L	M	A	A	A	D	L	L	L	H	P	.	.	.	.	.	.	.	A	Y	Q	E	A	A	G	I	V	L	L	E	A	I	T	A	G	L	P	V	L	T	T	A	V	C	G	Y	A	H	Y	I	A	D	A
Query Conservation																																								.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	L	R	R	L	A	T	D	V	S	Q	N	V	K	F	L	G	R	L	E	Y	Q	D	M	I	N	T	L	A	A	A	D	I	F	A	M	P	A	R	T	R	G	G	G	L	D	V	E	G	L	G	I	V	Y	L	E	A	Q	A	C	G	V	P	V	I	A	G	T	S	G	G	A	P	E	T	V	T	P	A
Template Known Secondary structure								T	G	G	G	G	G	G						S														S									B	G	G	G	T	B				S										T	T							S	S	T	T	G	G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		N	C	G	T	V	I	A	E	P	F	S	Q	E	Q	L	N	E	V	L	R	K	A	L	T	Q	S	P	L	R	M	A	W	A	E	N	A	R	H	Y	A	D	T	.	Q	D	L	Y	S	L	P	E	K	A	A	D	I	I	T	G
Query Conservation																																												.
Alig confidence		.						.																																				.
Template Conservation		.						.
Template Sequence		.	T	G	L	V	V	.	E	G	S	D	V	D	K	L	S	E	L	L	I	E	L	L	D	D	P	I	R	R	A	A	M	G	A	A	G	R	A	H	V	E	A	E	W	S	W	E	I	M	G	E	R	L	T	N	I	L	Q	S
Template Known Secondary structure		.	T					.		T	T														T																				T	B														S
Template Predicted Secondary structure		.						.
Template SS confidence
			322	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions