Job Description P25740 Confidence 97.62% Date Thu Jan 5 11:42:26 GMT 2012 Rank 53 Aligned Residues 240 % Identity 18% Template c3ddsB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycogen phosphorylase, liver form; PDBTitle: crystal structure of glycogen phosphorylase complexed with an2 anthranilimide based inhibitor gsk261 Resolution 1.80 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																											.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	T	F	E	Q	G	K	S	T	K	L	M	M	L	T	D	K	Q	I	A	D	F	Q	K	.	.	.	.	.	H	Y	Q	T	E	P	E	R	F	Q	I	L	P	P	G	I	Y	P	D	R	K	Y	S	E	Q	I	P	N	S	R	E	I	Y	R	Q	K	N	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	H	L	C	I	V	G	S	H	A	V	N	G	V	A	K	I	H	S	D	I	V	K	T	K	V	F	K	D	F	S	E	L	E	P	D	K	F	Q	N	K	T	N	G	I	T	P	R	R	W	L	L	L	C	N	P	G	L	A	E	L	I	A	E	K	I	G	E	D	Y	V	K	D	L	S	Q	L	T	K
Template Known Secondary structure									T		S					S	S										T	T	T								G	G	G								B		T							T														S	G	G	G	T		G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
																																						192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.						.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.													.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.													.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	E	Q	Q	N	L	L	L	Q	V	G	S	D	F	G	R	K	G	V	D	R	.	.	.	.	S	I	E	A	L	A	S	L	P	E	S	L	.	.	.	.	.	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.													.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		L	H	S	F	L	G	D	D	V	F	L	R	E	L	A	K	V	K	Q	E	N	K	L	K	F	S	Q	F	L	E	T	E	Y	K	V	K	I	N	P	S	S	M	F	D	V	Q	V	K	R	I	H	E	Y	K	R	Q	L	L	N	C	L	H	V	I	T	M	Y	N	R	I	K	K	D	P	K	K	L	F	V	P
Template Known Secondary structure		G	G	G	G	T	T																																	T	T	S							S				T	T	T	T																			T	T	S
Template Predicted Secondary structure
Template SS confidence
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.																.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query Sequence		H	N	T	L	L	F	V	V	G	Q	D	K	P	R	K	F	E	A	L	A	E	K	L	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	N	V	H	F	F	S	G	R	N	D	V	S	E	L	M	A	A	A	D	L	L	L	H	P	A	Y	Q	.	.	E	A	A	G	I	V	L	L	E
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation
Template Sequence		R	T	V	I	I	G	G	K	A	A	P	G	Y	H	M	A	K	M	I	I	K	L	I	T	S	V	A	D	V	V	N	N	D	P	M	V	G	S	K	L	K	V	I	F	L	E	N	Y	R	V	S	L	A	E	K	V	I	P	A	T	D	L	S	E	Q	I	S	T	A	G	T	E	A	S	G	T	G	N	M	K
Template Known Secondary structure												T	T																						T	T	T	G	G	G							T	T										G	G	G		S								T	T	S		S			S
Template Predicted Secondary structure
Template SS confidence
		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.																																										320	.	.	.	.	.	.
Predicted Secondary structure																								.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	T	A	G	L	P	V	L	T	T	A	V	C	G	Y	A	H	Y	I	A	D	.	.	A	N	C	G	T	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	F	S	Q	E	Q
Query Conservation																								.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	M	L	N	G	A	L	T	I	G	T	M	D	G	A	N	V	E	M	A	E	E	A	G	E	E	N	L	F	I	F	G	M	R	I	D	D	V	A	A	L	D	K	K	G	Y	E	A	K	E	Y	Y	E	A	L	P	E	L	K	L	V	I	D	Q	I	D	N	G	F	F	S	P	K	Q	P	D	L	F	K	D
Template Known Secondary structure					T	T							S		T	T										G	G	G	S				S																T																				T	T	T		T	T	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		681	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760
		327	.																							.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	L	R	K	A	L	T	Q	S	P	L	R	M	A	W	A	E	N	A	R	H	Y	A	D	T	Q	D	L	Y	S	L	P	E	K	A	A	D	I	I
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	N	M	L	F	Y	H	D	R	F	K	V	F	A	D	Y	E	A	Y	V	K	C	Q	D	K	V	S	Q	L	Y	M	N	P	K	A	W	N	T	M	V	L	K	N	I	A	A	S	G	K	F	S	S	D	R	T	I	K	E	Y	A	Q	N	I
Template Known Secondary structure											T	T																					T															T		G	G	G	B												T
Template Predicted Secondary structure
Template SS confidence
		761	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions