Job Description P25740 Confidence 99.96% Date Thu Jan 5 11:42:26 GMT 2012 Rank 26 Aligned Residues 319 % Identity 11% Template c2q6vA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucuronosyltransferase gumk; PDBTitle: crystal structure of gumk in complex with udp Resolution 2.28 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	V	A	F	C	L	Y	K	Y	F	P	F	G	G	L	Q	R	D	F	M	R	I	A	S	T	V	A	A	R	G	H	H	V	R	V	Y	T	Q	S	W	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	C	P	K	A	F	E	L	I	Q	V	P	V	K	S	H	T	N	H	G
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		C	Y	L	V	L	S	S	H	D	F	R	.	.	T	P	R	R	A	N	I	H	F	I	T	D	Q	L	A	L	R	G	T	T	R	F	F	S	L	R	Y	S	R	L	S	R	M	K	G	D	M	R	L	P	L	D	D	T	A	N	T	V	V	S	H	N	G	V	D	C	Y	L	W	R	T	T	V	H	P	F	N
Template Known Secondary structure								S	S		T	T	.	.		S	S															S								S		B	S	G	G	G	T	T	T		T	T	G	G	G	G	G	G	T	T	S					T	T								B	S	S
Template Predicted Secondary structure													.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.															.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	A	E	Y	Y	A	W	V	Q	N	H	L	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	A	D	R	V	V	G	F	N	K	M	P	G	L	D	V	Y	F	A	A	D	V	C	Y	A	E	K	V	A	Q	E	K	G	F	L	Y	R	L	T	S	R	Y	R	H	Y	A	A	F	E	R
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.
Template Conservation																																																																																.	.
Template Sequence		T	R	R	S	W	L	R	P	V	E	D	A	M	F	R	W	Y	A	A	H	P	P	K	Q	L	L	D	W	M	R	E	S	D	V	I	V	F	E	S	G	I	A	V	A	F	I	E	L	A	K	R	V	N	P	A	A	K	L	V	Y	R	A	S	D	G	L	S	T	I	N	V	A	S	Y	I	E	R	E	.	.
Template Known Secondary structure			S		G	G	G																											S						S	S	G	G	G	G	G									T	T	S							S	S		T	T	T	T	T									.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	F	E	Q	G	K	S	T	K	L	M	M	L	T	D	K	Q	I	A	D	F	Q	K	H	Y	Q	T	E	P	E	R	F	Q	I	L	P	P	G	I	Y	P	D	R	K	Y	S	E	Q	I	P	N	S	R	E	I	Y	R	Q	K	N	G	I	K	E	Q	Q	N	L	L	L	Q	V	G	S	D	F	G	R	K
Query Conservation
Alig confidence																						.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	R	V	A	P	T	L	D	V	I	A	L	V	S	P	A	M	A	A	.	.	.	.	.	E	V	V	S	R	D	N	V	F	H	V	G	H	G	V	D	H	N	L	D	Q	L	G	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	Y	A	E	G	I	H	A	V	A	V	G	S	M	L	F
Template Known Secondary structure						G	G	G		S					S		G	G	G	G	G	.	.	.	.	.	G		S		S	T	T								B		T	T					T		S	.	.	.	.	.	.	.	.	.	.	.	.	.		S			S	S									T	T	B
Template Predicted Secondary structure																						.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.														.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		G	V	D	R	S	I	E	A	L	A	S	L	P	E	S	L	R	H	N	T	L	L	F	V	V	G	Q	D	K	P	R	K	F	E	A	L	A	E	K	L	G	V	R	S	N	V	H	F	F	S	G	R	N	D	V	S	E	L	M	A	A	A	D	L	L	L	H	P	A	Y	Q	E	A	A	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence														.	.	.	.																		.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation														.	.	.	.																		.	.	.	.	.	.
Template Sequence		D	P	E	F	F	V	V	A	S	K	A	F	.	.	.	.	P	Q	V	T	F	H	V	I	G	S	G	M	G	R	H	P	G	.	.	.	.	.	.	Y	G	D	N	V	I	V	Y	G	E	M	K	H	A	Q	T	I	G	Y	I	K	H	A	R	F	G	I	A	P	Y	A	S	E	Q	V	P	V	Y	L	A	D
Template Known Secondary structure														.	.	.	.	T	T							S		S	S				T	T	.	.	.	.	.	.			T	T																		T		S						B	S		S		S		T	T
Template Predicted Secondary structure														.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.					.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.							.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
			284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	I	V	L	L	E	A	I	T	A	G	L	P	V	L	T	T	A	V	C	G	Y	A	H	Y	I	A	D	A	N	C	G	T	V	I	A	E	P	F	S	Q	E	Q	L	N	E	V	L	R	K	A	L	T	Q	S	P	L	R	M	A	W	A	E	N	A	R	H	Y	A	D	T	Q	D	L	Y	S	L	P	E
Query Conservation		.
Alig confidence		.																									.	.	.	.	.								.																								.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.								.																								.	.	.	.	.	.	.	.	.
Template Sequence		S	S	M	K	L	L	Q	Y	D	F	F	G	L	P	A	V	C	P	N	A	V	V	G	P	Y	.	.	.	.	.	K	S	R	F	G	Y	T	.	P	G	N	A	D	S	V	I	A	A	I	T	Q	A	L	E	A	P	R	V	R	Y	R	.	.	.	.	.	.	.	.	.	Q	C	L	N	W	S	D	T	T	D
Template Known Secondary structure												T	T							G	G	G	T		S		.	.	.	.	.	S	S						.	T	T																					S	.	.	.	.	.	.	.	.	.				B
Template Predicted Secondary structure																											.	.	.	.	.								.																								.	.	.	.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.						.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.										.	360	.	.	.	.	.	.	.	.
		363	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	L	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions