Job Description P25740 Confidence 99.90% Date Thu Jan 5 11:42:26 GMT 2012 Rank 32 Aligned Residues 335 % Identity 14% Template c2p6pB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase; PDBTitle: x-ray crystal structure of c-c bond-forming dtdp-d-olivose-transferase2 urdgt2 Resolution 1.88 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	V	A	F	C	L	Y	K	Y	F	P	F	G	G	L	Q	R	D	F	M	R	I	A	S	T	V	A	A	R	G	H	H	V	R	V	Y	T	Q	S	W	E	G	D	C	P	K	A	F	E	L	I	Q	V	P	V	K	S	H	T	N	H	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.
Template Sequence		M	R	I	L	F	V	A	.	.	.	A	G	S	P	A	T	V	F	A	L	A	P	L	A	T	A	A	R	N	A	G	H	Q	V	V	M	A	A	N	Q	D	M	G	P	V	V	T	G	V	G	L	P	A	V	A	T	T	D	L	P	I	R	H	F	I	T	T	D	R	E	G	R	P	E	A	I	P	S	D	P
Template Known Secondary structure									.	.	.		S	S																	T	T									G	G	G						T	T	T						S		S	S		G	G	G	G	S		B		T	T	S		B					S	S
Template Predicted Secondary structure									.	.	.
Template SS confidence
		1	.	.	.	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
																65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	E	Y	Y	A	W	V	Q	N	H	L	K	E	H	P	A	D	R	V	V	G	F	N	K	M	P	G	L	D	V	Y	F	A	A	D	V	C	Y	A	E	K	V	A	Q	E	K	G	F	L	Y	R	L	T	S	R	Y	R	H	Y	A	A	F	E	R	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	Q	A	R	F	T	G	R	W	F	A	R	M	A	A	S	S	L	P	R	M	L	D	F	S	R	A	W	R	P	D	L	I	V	G	G	T	M	S	Y	V	A	P	L	L	A	L	H	L	G	V	P	H	A	R	Q	T	W	D	A	V	D	A	D	G	I	H	P	G	A	D	A	E	L	R	P	E	L	S
Template Known Secondary structure																																	S						T	T		T										T								S	S	S				T	T	T								T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	E	Q	G	K	S	T	K	L	M	M	L	T	D	K	Q	I	A	D	F	Q	K	H	Y	Q	T	E	P	E	R	F	Q	I	L	P	P	G	I	Y	P	D	R	K	Y	S	E	Q	I	P	N	S	R	E	I	Y	R	Q	K	N	G	I	K	E	Q	Q	N	L	L	L	Q	V	G	S	D	F	G	R	K	G
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	G	L	E	R	L	P	A	P	D	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	I	C	P	P	S	L	R	P	A	N	A	A	P	A	R	M	M	R	H	V	A	T	S	R	Q	C	P	L	E	P	W	M	Y	T	R	D	T	R	Q	R	V	L	V	T	S	G	D	R	N	F	D	F
Template Known Secondary structure			T	T		S	S					S			.	.	.	.	.	.	.	.	.	.	.	.	.				S		G	G	G	S		S	S																				G	G	G	G				S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170														.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	R	S	I	E	A	L	A	S	L	P	E	S	L	R	H	N	T	L	L	F	V	V	G	Q	D	K	P	R	K	F	E	A	L	A	E	K	L	G	V	R	S	N	V	H	F	F	S	G	R	N	D	V	S	E	L	M	A	A	A	D	L	L	L	H	P	A	Y	Q	E	A	A	G	I	V	L	L	E	A
Query Conservation
Alig confidence												.	.	.	.	.																									.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation												.	.	.	.	.																									.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		L	R	G	L	A	K	D	L	V	R	.	.	.	.	.	W	D	V	E	L	I	V	A	A	P	D	T	V	A	E	A	L	R	A	E	V	P	Q	A	.	.	.	.	.	.	.	.	R	V	G	W	T	P	L	D	V	V	A	P	T	C	D	L	L	V	H	H	.	.	.	.	A	G	G	V	S	T	L	T	G
Template Known Secondary structure												.	.	.	.	.	T	T																				T	T	S	.	.	.	.	.	.	.	.			S								G	G	G		S						.	.	.	.		S		S
Template Predicted Secondary structure												.	.	.	.	.																									.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.									.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.					.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																.	.	.	.																				.	.
Query SS confidence																.	.	.	.																				.	.
Query Sequence		I	T	A	G	L	P	V	L	T	T	A	V	C	G	.	.	.	.	Y	A	H	Y	I	A	D	A	N	C	G	T	V	I	A	E	P	F	S	.	.	Q	E	Q	L	N	E	V	L	R	K	A	L	T	Q	S	P	L	R	M	A	W	A	E	N	A	R	H	Y	A	D	T	Q	D	L	Y	S	L	P	E	K	A
Query Conservation																.	.	.	.																				.	.
Alig confidence																.	.	.	.															.					.	.
Template Conservation																																		.
Template Sequence		L	S	A	G	V	P	Q	L	L	I	P	K	G	S	V	L	E	A	P	A	R	R	V	A	D	Y	G	A	A	I	A	L	.	L	P	G	E	D	S	T	E	A	I	A	D	S	C	Q	E	L	Q	A	K	D	T	Y	A	R	R	A	Q	D	L	S	R	E	I	S	G	M	P	L	P	A	T	V	V	T	A	L
Template Known Secondary structure					T									S														T	S					.		T	T	T																																T	S
Template Predicted Secondary structure																																		.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		365	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	I	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q	L	A	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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