 |
Job Description | P25740 | Confidence | 91.82% | Date | Thu Jan 5 11:42:26 GMT 2012 |
Rank | 73 | Aligned Residues | 86 |
% Identity | 8% | Template | c2ixdB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:lmbe-related protein; |
PDBTitle: crystal structure of the putative deacetylase bc1534 from2 bacilus cereus
|
Resolution | 1.8 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | I | V | A | F | C | L | Y | K | Y | F | P | F | G | G | L | Q | R | D | F | M | R | I | A | S | T | V | A | A | R | G | H | H | V | R | V | Y | T | Q | S | W | E | G | D | C | P | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | F | E | L | I | Q | V | P | V | K | S | H | T | N | H | G |
Query Conservation |   |
|
|
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |
|
|
|
|
| . | . | . |
|   |
|   |   |
|
|
|
|
|   |   |   |   |   |
|   |   |
|   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
L | H | I | L | A | F | G | A | H | A | D | D | . |
. |
. |
V | E | I | G | M | A | G | T | I | A | K | Y | T | K | Q | G | Y | E | V | G | I | C | D | L | T | E | A | D | L | S | S | N | G | T | I | E | L | R | K | E | E | A | K | V | A | A | R | I | M | G | V | K | T | R | L | N | L | A | M | P | D | R | G | L | Y |
Template Known Secondary structure |   |
| S |  |  |  |  |  | S | S | T | T |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
|
| T | T |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |
| T | T |
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | |
|
|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | N | A | E | Y | Y | A | W | V | Q | N | H | L | K | E | H | P | A | D | R | V | V | G | F | N | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |   |   |
Template Sequence |   |
M | K | E | E | Y | I | R | E | I | V | K | V | I | R | T | Y | K | P | K | L | V | F | A | P | Y | Y |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|