Job Description P25740 Confidence 100.00% Date Thu Jan 5 11:42:26 GMT 2012 Rank 18 Aligned Residues 315 % Identity 15% Template c2iv3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycosyltransferase; PDBTitle: crystal structure of avigt4, a glycosyltransferase involved2 in avilamycin a biosynthesis Resolution 2.3 Å

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		1	.	.	.	.	.	.	.	.	10												.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.			.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.			.	.
Query Sequence		M	I	V	A	F	C	L	Y	K	Y	.	.	.	.	.	.	.	.	.	.	.	F	P	.	.	F	G	G	L	Q	R	D	F	M	R	I	A	S	T	V	A	A	R	G	H	H	V	R	V	Y	T	Q	S	W	E	G	D	C	P	K	A	F	E	L	I	Q	V	P	V	K	S	H	T	N	H	G	R	N	A	E
Query Conservation												.	.	.	.	.	.	.	.	.	.	.			.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.			.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	V	A	L	V	N	I	P	L	R	V	P	G	S	D	A	W	I	S	V	P	P	Q	G	Y	G	G	I	Q	W	V	V	A	N	L	M	D	G	L	L	E	L	G	H	E	V	F	L	L	G	A	P	S	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	G	L	T	V	V	P	A	G
Template Known Secondary structure												B		T	T	S	S	S	B			S	S		S	S	S																	T	T							S						.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T					S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.															70	.	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	A	W	V	Q	N	H	L	K	E	H	P	A	D	R	V	V	G	F	N	K	M	P	G	L	D	V	Y	F	A	A	D	V	C	Y	A	E	K	V	A	Q	E	K	G	F	L	Y	R	L	T	S	R	Y	R	H	Y	A	A	F	E	R	A	T	F	E	Q	G	K	S	T	K	L	M	M	L	T	D	K	Q
Query Conservation
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	E	E	I	E	R	W	L	R	T	A	D	V	D	V	V	H	D	H	S	G	G	V	I	G	P	A	G	L	P	P	G	T	A	F	I	S	S	H	H	F	T	T	R	P	V	N	P	V	G	C	T	Y	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S														S						S	S	S	S	S		S	T	T			T	T									S	S	S			S			T	T				S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	D	F	Q	K	H	Y	Q	T	E	P	E	R	F	Q	I	L	P	P	G	I	Y	P	D	R	K	Y	S	E	Q	I	P	N	S	R	E	I	Y	R	Q	K	N	G	I	K	E	Q	Q	N	L	L	L	Q	V	G	S	D	F	G	R	K	G	V	D	R	S	I	E	A	L	A	S	L	P	E	S	L	R	H
Query Conservation
Alig confidence		.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	R	A	Q	R	A	H	C	G	G	G	D	D	A	P	V	I	P	I	P	V	D	P	A	R	Y	R	S	A	A	D	Q	V	A	.	.	.	.	.	.	.	.	.	.	.	.	K	E	D	F	L	L	F	M	G	R	V	S	P	H	K	G	A	L	E	A	A	A	F	A	H	A	C	G	R	R	L	V	L
Template Known Secondary structure		.	.								T			T	T	S		B					B		G	G	G	S			G	G	G				.	.	.	.	.	.	.	.	.	.	.	.			S						S			S	G	G	G	T											T	T
Template Predicted Secondary structure		.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170													.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		N	T	L	L	F	V	V	G	Q	D	K	P	R	.	K	F	E	A	L	A	E	K	L	G	V	R	S	N	V	H	F	F	S	G	R	N	D	V	S	E	L	M	A	A	A	D	L	L	L	H	P	A	Y	Q	E	A	A	G	I	V	L	L	E	A	I	T	A	G	L	P	V	L	T	T	A	V	C	G	Y	A
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		A	G	P	A	W	E	P	E	Y	F	D	E	I	T	R	R	Y	G	S	T	V	E	P	I	G	E	V	G	G	E	R	R	L	D	L	L	A	S	A	H	A	V	L	A	M	S	Q	A	V	T	G	I	W	C	E	P	G	A	T	V	V	S	E	A	A	V	S	G	T	P	V	V	G	T	G	N	G	C	L	A
Template Known Secondary structure			S																T	T	T						S														S																	S										T	T								S	T	T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	I	A	D	A	N	C	G	T	V	I	A	E	P	F	S	Q	E	Q	L	N	E	V	L	R	K	A	L	T	Q	S	P	L	R	M	A	W	A	E	N	A	R	H	Y	A	D	T	Q	D	L	Y	S	L	P	E	K	A	A	D	I	I	T	G	G	L	D	G
Query Conservation
Alig confidence							.	.								.	.																													.	.	.
Template Conservation							.	.								.	.																													.	.	.
Template Sequence		E	I	V	P	S	.	.	V	G	E	V	V	G	Y	.	.	G	T	D	F	A	P	D	E	A	R	R	T	L	A	G	L	P	A	S	D	E	V	R	R	A	A	V	R	.	.	.	L	W	G	H	V	T	I	A	E	R	Y	V	E	Q	Y	R	R	L	L	A	G
Template Known Secondary structure				G	G	G	.	.	T						S	.	.	S	S													T	S													.	.	.			B																		T
Template Predicted Secondary structure							.	.								.	.																													.	.	.
Template SS confidence
		288	.	290	.	.			.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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