 |
Job Description | P25740 | Confidence | 44.28% | Date | Thu Jan 5 11:42:26 GMT 2012 |
Rank | 279 | Aligned Residues | 105 |
% Identity | 14% | Template | c1xvlC_ |
PDB info |
PDB header:metal transport | Chain: C: PDB Molecule:mn transporter; |
PDBTitle: the three-dimensional structure of mntc from synechocystis2 6803
|
Resolution | 2.90 Å |
|
 |
  |   |
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | R | S | N | V | H | F | F | S | G | R | N | D | V | S | E | L | M | A | A | A | D | L | L | L | H | P | A | Y | Q | E | A | A | G | I | V | L | L | E | A | I | T | A | G | L | P | V | L | T | T | A | V | C | G | Y | A | H | Y | I | A | D | A | N | C | G | T | V | I | A | E | P | F | S | Q | E | Q | L | N | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|
|
|   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |
|   |   |   |
|   |
|
|   |   |
|   |   |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |
|   |   |   |   |
|   |
Template Sequence |   |
I | G | A | E | I | H | G | Y | E | P | T | P | S | D | I | V | K | A | Q | D | A | D | L | I | L | Y | N | G | M | N | L | E | R | W | F | E | Q | F | L | G | N | V | K | D | V | P | S | V | V | L | T | E | G | I | E | P | I | P | I | A | D | D | K | P | N | P | H | A | W | M | S | P | R | N | A | L | V | Y | V | E |
Template Known Secondary structure |   |
S | S | S |
| S | T | T |
|
|
|
|  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| T | T | S | S | T | T |  |  |  |  |  |  |  |
|
| S |
|
|  |  |  | T | T | T | T |
|
|
|
|
|
|
|
|
|
|
|
| S |
| G | G | G | S | T | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
  |
  |   |
330 | . | . | . | . | . | . | |
|
. | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | R | K | A | L | T | . |
. |
Q | S | P | L | R | M | A | W | A | E | N | A | R | H | Y | A | D | T |
Query Conservation |   |
|
|   |   |
|
|   | . | . |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
N | I | R | Q | A | F | V | E | L | D | P | D | N | A | K | Y | Y | N | A | N | A | A | V | Y | S | E | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|