Job Description P0ABE5 Confidence 92.70% Date Thu Jan 5 11:15:18 GMT 2012 Rank 6 Aligned Residues 137 % Identity 15% Template d2e74a1 SCOP info Heme-binding four-helical bundle Transmembrane di-heme cytochromes Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Resolution 3.00

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	F	L	L	V	I	A	A	Y	C	A	M	E	F	R	G	F	F	P	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	P	L	I	N	M	I	H	V	S	C	G	I	S	I	L	V	L	M	V	V	R	L	L	L	R	L	K	Y	P	T	P	P	I	I	P	K	P	K	P
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	L	T	C	F	L	I	Q	F	A	T	G	F	A	M	T	F	Y	Y	K	P	T	V	T	E	A	Y	A	S	V	Q	Y	I	M	N	E	V	S	F	G	W	L	I	R	S	I	H	R	W	S	A	S	M	M	V	L	M	M	I	L	H	V	F	R	V	Y	L	T	G	G	F	K	K	P	R	E	L	T	W
Template Known Secondary structure																			T	T				S	T	T	T											T	S	T	T																												T	T	T	T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.						.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.												.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140
Predicted Secondary structure																											.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence																											.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		M	M	T	G	L	A	H	L	G	H	L	V	I	Y	L	L	F	I	A	L	P	V	I	G	L	.	.	.	.	.	V	M	M	Y	N	R	G	N	P	W	F	A	F	G	L	T	M	P	Y	.	.	.	.	.	.	.	.	.	.	.	A	S	E	A	N	F	E	R	V	D	S	L	K	S	W	H	.	E	T	L
Query Conservation																											.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence							.	.	.	.	.	.	.														.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation							.	.	.	.	.	.	.
Template Sequence		I	S	G	V	I	.	.	.	.	.	.	.	L	A	V	I	T	V	S	F	G	V	T	G	Y	S	L	P	W	D	Q	V	G	Y	W	A	V	K	I	V	S	G	V	P	E	A	I	P	V	V	G	V	L	I	S	D	L	L	R	G	G	S	S	V	G	Q	A	T	L	T	R	Y	Y	S	A	H	T	F	V	L
Template Known Secondary structure							.	.	.	.	.	.	.													T	T	T	T													T	T	G	G	G	G	S	T	T	T										T	S	S	S		S													T
Template Predicted Secondary structure							.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	L	G	Y	F	V	I	G	L	H	A	A	A	A	L	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	W	L	I	A	V	F	M	L	L	H	F	L	M	I	R	K	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions