Job Description P0ABE5 Confidence 99.92% Date Thu Jan 5 11:15:18 GMT 2012 Rank 1 Aligned Residues 157 % Identity 16% Template d1kqfc_ SCOP info Heme-binding four-helical bundle Transmembrane di-heme cytochromes Formate dehydrogenase N, cytochrome (gamma) subunit Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.																																				.	.	.
Query SS confidence																																					.	.	.	.	.	.	.																																				.	.	.
Query Sequence		N	K	Y	S	R	L	Q	I	S	I	H	W	L	V	F	L	L	V	I	A	A	Y	C	A	M	E	F	R	G	F	F	P	R	S	D	.	.	.	.	.	.	.	R	P	L	I	N	M	I	H	V	S	C	G	I	S	I	L	V	L	M	V	V	R	L	L	L	R	L	K	Y	P	T	P	P	I	I	.	.	.
Query Conservation																																					.	.	.	.	.	.	.																																				.	.	.
Alig confidence																																					.	.	.	.	.	.	.																																				.	.	.
Template Conservation
Template Sequence		V	R	T	K	F	I	D	R	A	C	H	W	T	V	V	I	C	F	F	L	V	A	L	S	G	I	S	F	F	F	P	T	L	Q	W	L	T	Q	T	F	G	T	P	Q	M	G	R	I	L	H	P	F	F	G	I	A	I	F	V	A	L	M	F	M	F	V	R	F	V	H	H	N	I	P	D	K	K	D	I	P
Template Known Secondary structure				S																												T	T		G	G	G	G	G	T	T	S	S																											G	G	G	S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
																	73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	P	K	P	M	M	T	G	L	A	H	L	G	H	L	V	I	Y	L	L	F	I	A	L	P	V	I	G	L	V	M	M	Y	N	R	G	N	P	W	F	A	F	G	L	T	M	P	Y	A	S	E	A	N	F	E	R	V	D	S	L	K	S	W	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	L	L	N	I	V	E	V	L	K	G	N	E	H	K	V	A	D	V	G	K	Y	N	A	G	Q	K	M	M	F	W	S	I	M	S	M	I	F	V	L	L	V	T	G	V	I	I	.	.	.	.	.	.	.	.	.	.	.	.	W	R	P	Y	F	A	Q	Y	F	P	M	Q	V	V	R	Y	S	L	L	I	H
Template Known Secondary structure					S						T	T										S	S																									T	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T	G	G	G	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.													.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	L	A	N	L	G	Y	F	V	I	G	L	H	A	A	A	A	L	A	H	H	Y	F	W	K	D	N	T	L	L	R	M	M	P	R	K	R	S
Query Conservation
Alig confidence																							.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		A	A	A	G	I	I	L	I	H	A	I	L	I	H	M	Y	M	A	F	W	V	.	.	.	.	.	K	G	S	I	K	G	M	I	E	G	K	V	S
Template Known Secondary structure																						S	.	.	.	.	.	T	T							T
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions