Job Description P0ABE5 Confidence 94.47% Date Thu Jan 5 11:15:18 GMT 2012 Rank 4 Aligned Residues 137 % Identity 16% Template c3cx5N_ PDB info PDB header:oxidoreductase Chain: N: PDB Molecule:cytochrome b; PDBTitle: structure of complex iii with bound cytochrome c in reduced2 state and definition of a minimal core interface for3 electron transfer. Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	F	L	L	V	I	A	A	Y	C	A	M	E	F	R	G	F	F	P	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	P	L	I	N	M	I	H	V	S	C	G	I	S	I	L	V	L	M	V	V	R	L	L	L	R	L	K	Y	P	T	P	P	I	I	P	K	P	K	P
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	G	L	C	L	V	I	Q	I	V	T	G	I	F	M	A	M	H	Y	S	S	N	I	E	L	A	F	S	S	V	E	H	I	M	R	D	V	H	N	G	Y	I	L	R	Y	L	H	A	N	G	A	S	F	F	F	M	V	M	F	M	H	M	A	K	G	L	Y	Y	G	S	Y	R	S	P	R	V	T	L	W
Template Known Secondary structure																			T	T				S	T	T	T											T	S	T	T																													T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.						.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.												.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	M	T	G	L	A	H	L	G	H	L	V	I	Y	L	L	F	I	A	L	P	V	I	G	L	.	.	.	.	.	V	M	M	Y	N	R	G	N	P	W	F	A	F	G	L	T	M	P	Y	A	S	.	.	.	.	.	.	.	.	.	.	.	E	A	N	F	E	R	V	D	S	L	K	S	W	H	E	T	L	A
Query Conservation																											.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.														.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.
Template Sequence		N	V	G	V	I	.	.	.	.	.	.	.	I	F	I	L	T	I	A	T	A	F	L	G	Y	C	C	V	Y	G	Q	M	S	H	W	G	A	T	V	I	T	N	L	F	S	A	I	P	F	V	G	N	D	I	V	S	W	L	W	G	G	F	S	V	S	N	P	T	I	Q	R	F	F	A	L	H	Y	L	V	P
Template Known Secondary structure							.	.	.	.	.	.	.																		B													G	G	G	G	S	T	T	T										T	S	S	S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	G	Y	F	V	I	G	L	H	A	A	A	A	L	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	I	A	A	M	V	I	M	H	L	M	A	L	H	I	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions