Job Description P76161 Confidence 48.03% Date Thu Jan 5 12:19:56 GMT 2012 Rank 31 Aligned Residues 45 % Identity 24% Template c3trzE_ PDB info PDB header:rna binding protein/rna Chain: E: PDB Molecule:protein lin-28 homolog a; PDBTitle: mouse lin28a in complex with let-7d microrna pre-element Resolution 2.90 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	A	S	K	A	R	C	E	H	C	S	G	T	G	F	Y	N	V	L	R	E	V	V	K	H	Y	R	R	G	E	S	V	I	K	E	E	W	V	K	E	L	C	Q	H	C	H	G	K	G	E	A	S	T	A	C	R	G
Query Conservation
Alig confidence																						.	.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.										.	.	.	.	.	.	.	.	.
Template Sequence		C	I	G	S	E	D	R	C	Y	N	C	G	G	L	D	H	H	A	K	E	.	.	.	.	C	K	L	P	P	Q	P	K	K	.	.	.	.	.	.	.	.	.	C	H	F	C	Q	S	I	N	H	M	V	A	S	C	P	L
Template Known Secondary structure										T	T	T			S	S			G	G	G	.	.	.	.			S							.	.	.	.	.	.	.	.	.		T	T	T			S	S			G	G	G		T	T
Template Predicted Secondary structure																						.	.	.	.										.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.										.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions