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Job DescriptionP76161
Confidence80.00%DateThu Jan 5 12:19:56 GMT 2012
Rank14Aligned Residues49
% Identity37%Templatec3pihA_
PDB info PDB header:hydrolase/dnaChain: A: PDB Molecule:uvrabc system protein a; PDBTitle: t. maritima uvra in complex with fluorescein-modified dna
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120 .........130.........140..
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Query Sequence  AASKARCEHCSGTG. . . . . . . FYNVLREVVKHYRRGESVIKEE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                       

 
   
 
  
 
 
     
                                    
Template Sequence  FSENLMCPVCGIGFPEITPKLFSFNSPYGACPNCHGLGFTFEVDPSLVAIIPYRWDRRLSRWVAREIEKRGVSPPEDVKE
Template Known Secondary structure  SS
B
TTT






SGGGG
TTSTTTB
TTTTTSS
S




GGGTT
TTTT




S
T
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   246...250.........260.........270.........280.........290.........300.........310.........320.....
 
   143......150.....
Predicted Secondary structure  ...............................




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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WVKELCQHCHGKG
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Template Sequence  FILYGDFEGVVPKVQRWHRETEMKEWLEKNFIVQRTCSVCGGRR
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TT
TTT
S

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   343......350.........360.........370.........380......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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