Return to main results Retrieve Phyre Job Id

Job DescriptionP76161
Confidence9.98%DateThu Jan 5 12:19:56 GMT 2012
Rank91Aligned Residues45
% Identity20%Templatec3nybB_
PDB info PDB header:transferase/rna binding proteinChain: B: PDB Molecule:protein air2; PDBTitle: structure and function of the polymerase core of tramp, a rna2 surveillance complex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150.........160...
Predicted Secondary structure 




























Query SS confidence 



















































Query Sequence  RCEHCSGTGFYNVLREVVKHYRRGESVIKEEWVKELCQHCHGKGEASTACRG
Query Conservation   
  
 
 
         
  
 
 
          
  
 
 
 
   
  
Alig confidence 













.......






























Template Conservation 

  

  

    .......

             
  

  

    

 
Template Sequence  QCTLCKSKKHSKER. . . . . . . CPSIWRAYILVHTIYCYNCGGKGHFGDDCKE
Template Known Secondary structure 

SSS

SSS
GGG.......
GGGT








B
SSSS
BSS
GGG
SS
Template Predicted Secondary structure 













.......
























Template SS confidence 



















































   122.......130..... ....140.........150.........160......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions