Job Description P76161 Confidence 52.84% Date Thu Jan 5 12:19:56 GMT 2012 Rank 28 Aligned Residues 77 % Identity 14% Template c3a44D_ PDB info PDB header:metal binding protein Chain: D: PDB Molecule:hydrogenase nickel incorporation protein hypa; PDBTitle: crystal structure of hypa in the dimeric form Resolution 3.31 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.													.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																							.	.																										.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence																							.	.																										.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		Q	F	A	I	E	G	L	L	N	Y	A	M	A	L	D	N	P	T	L	N	K	.	.	L	S	E	E	I	R	L	Q	I	I	P	Y	L	V	S	F	A	F	A	D	Y	S	R	S	A	.	.	.	.	.	.	.	.	.	.	.	.	A	S	K	A	R	C	E	H	C	S	G	T	G	F	Y	N	V	L	R	.
Query Conservation																							.	.																										.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence																							.	.																										.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		D	A	I	V	R	T	V	L	D	Y	A	Q	R	E	G	A	S	R	V	K	A	V	R	V	V	L	G	E	L	Q	D	V	A	E	D	I	V	K	F	A	M	E	Q	L	F	A	G	T	I	A	E	G	A	E	I	E	F	V	E	E	E	A	V	F	K	C	R	N	C	N	Y	E	W	K	L	K	E	V	K	D
Template Known Secondary structure														T	T	T		S	S										T	T																	T	T	S	T	T	T	T															T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
													127	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	E	V	V	K	H	Y	R	R	G	E	S	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	D	E	R	I	E	V	V	H	A	F	L	A	C	P	K	C	G	S	H	D	F
Template Known Secondary structure									T	T	G	G	G		S		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions