Phyre 2 alignment of P76161 with c2jrpA

Job Description P76161
Confidence 27.68% Date Thu Jan 5 12:19:56 GMT 2012

Rank 48 Aligned Residues 49

% Identity 18% Template c2jrpA_

PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative cytoplasmic protein; PDBTitle: solution nmr structure of yfgj from salmonella typhimurium2 modeled with two zn+2 bound, northeast structural genomics3 consortium target str86

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.
Query Sequence	R	C	E	H	C	S	G	T	G	F	Y	N	V	L	R	E	V	V	K	H	Y	R	R	G	E	S	V	I	K	E	E	W	V	K	E	L	C	Q	H	C	H	G	K	G	E	A	S	T	A	.	.	.	.	.	.	.	C	R	G	C	K	G
Query Conservation																																																		.	.	.	.	.	.	.
Alig confidence								.																								.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation								.																								.	.	.	.	.
Template Sequence	T	C	P	V	C	H	H	.	A	L	E	R	N	G	D	T	A	H	C	E	T	C	A	K	D	F	S	L	Q	A	L	.	.	.	.	.	C	P	D	C	R	Q	P	L	Q	V	L	K	A	C	G	A	V	D	Y	F	C	Q	N	G	H	G
Template Known Secondary structure			S	S	S		S	.						S	S					T	T	T										.	.	.	.	.		S	S	S		S								T	T							T	T	T	T
Template Predicted Secondary structure								.																								.	.	.	.	.
Template SS confidence
	4	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.

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Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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