|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | L | P | K | Y | Y | S | P | K | S | P | K | L | S | D | D | A | P | A | . |
. |
. |
. |
. |
. |
. |
. |
T | G | T | G | C | L | T | I | T | D | V | M | A | A | Q | G | M | V | Q | S | K | A | P | L | G | L | A | L | F | L | A | K | V | G | V | Q | D | P | Q | F | A | I | E | G | L | L | N | Y | A | M | A | L |
Query Conservation |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . |   |
|   |
|   |
|
|   |
|
|   |   |
|
|   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|
|
|   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|
|   |   |   |
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
V | R | A | L | E | C | H | P | D | K | H | P | . |
. |
. |
E | N | P | K | A | V | E | T | F | Q | K | L | Q | K | A | K | E | I | L | T | N | E | E | S | R | A | R | Y | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | W | R | R | S | Q | M | S | M | P | F | Q | Q | W | E | A | L | N | D | S | V | K | T | S |
Template Known Secondary structure |   |
 |  |  |  | T | T |
| T | T | T |
| T | . | . | . | T |
| S | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | T |
| S | S |
|  |  |  |  |  |  |  |  |  |
| S | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
  |
  |   |
76 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
D | N | P | T |
Query Conservation |   |
  |   |   |   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|   |   |   |
Template Sequence |   |
G | P | S | S |
Template Known Secondary structure |   |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
Template SS confidence |   |
|
|
|
|
  |   |
108 | . | 110 | . |
  |