Job Description P0AGJ2 Confidence 100.00% Date Thu Jan 5 11:29:18 GMT 2012 Rank 13 Aligned Residues 182 % Identity 18% Template c3ilkB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized trna/rrna methyltransferase hi0380; PDBTitle: the structure of a probable methylase family protein from haemophilus2 influenzae rd kw20 Resolution 2.01 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		P	D	L	T	V	C	M	E	Q	V	H	K	P	H	N	V	S	A	I	I	R	T	A	D	A	V	G	V	H	E	V	H	A	V	W	P	G	S	R	M	R	T	M	A	S	A	A	A	G	S	N	S	W	V	Q	.	V	K	T	H	R	T	I	G	D	A	V	A	H	L	K	G	Q	G	M	Q	I	L	A	T
Query Conservation																																																									.
Alig confidence																																																									.																.	.	.	.
Template Conservation																																																																									.	.	.	.
Template Sequence		E	N	I	R	I	V	L	I	E	T	S	H	S	G	N	I	G	S	A	A	R	A	X	K	T	X	G	L	T	Q	L	C	L	V	S	P	K	S	V	D	E	Q	S	Y	A	L	S	A	G	A	E	N	I	V	K	N	A	R	V	V	D	S	F	D	E	A	V	D	D	C	S	.	.	.	.	L	V	I	G	T
Template Known Secondary structure		G	G							S		S																T								S		S			S								T	T							T					S	S					T	T	T		S	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.
		97	.	.	100	.	.	.											.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.
Query Sequence		H	L	S	D	N	A	V	.	.	.	.	.	.	.	.	.	.	D	F	R	E	I	D	Y	T	R	P	T	C	I	L	M	G	Q	E	K	T	G	I	T	Q	E	A	L	A	L	A	D	Q	D	I	I	I	P	M	I	G	M	V	Q	S	L	N	V	S	V	A	S	A	L	I	L	Y	E	A	Q	R	Q	R	Q
Query Conservation									.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	R	L	R	H	L	Q	N	T	L	I	E	P	R	E	C	A	E	K	V	V	A	Y	K	G	K	I	A	I	V	F	G	R	E	R	I	G	L	T	N	E	E	L	L	K	C	H	Y	H	L	N	I	P	A	N	P	D	Y	S	S	L	N	L	A	X	A	V	Q	L	V	S	Y	E	L	R	X	A	F	L
Template Known Secondary structure						G	G	G	T	T	T																S								B	T	T	T	B							T	T		S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	M	Y	L	R	E	N	S	M	L	P	E	A	E	Q	Q	R	L	L	F	E	G	G	Y	P	V	L	A	K	V	A	K	R	K	G	L	P	Y	P	H
Query Conservation
Alig confidence																						.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		V	Q	N	N	K	K	I	E	K	N	Y	P	T	T	D	Q	L	A	Y	F	.	.	.	.	.	F	D	Y	T	E	R	I	Y	Q	S	L	G	F	I	Q	N	Q
Template Known Secondary structure					T	T																.	.	.	.	.											T	T				S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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