Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGJ2
Confidence100.00%DateThu Jan 5 11:29:18 GMT 2012
Rank9Aligned Residues153
% Identity24%Templatec3gyqB_
PDB info PDB header:transferaseChain: B: PDB Molecule:rrna (adenosine-2'-o-)-methyltransferase; PDBTitle: structure of the thiostrepton-resistance methyltransferase2 s-adenosyl-l-methionine complex
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50....... ..60.........70.........80.........90..
Predicted Secondary structure 




















...






Query SS confidence 









































. . .


































Query Sequence  RQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRM. . . RTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQ
Query Conservation 
   
 



 
  
 








 



  
 

      ...      
 

   
 
         
  
   
  
Alig confidence 









































...


















.














Template Conservation       




 
 

 


 
 


 
 

  
 
            
 


 
          .     
  
      
Template Sequence  SRRGDVVVLDGVKIVGNIGAIVRTSLALGASGIILVDSDITSIADRRLQRASRGYVFSLPVVLS. GREEAIAFIRDSGMQ
Template Known Secondary structure  TS
S
S


TT

S


S
TT
TTT
TTSS
.
TT
Template Predicted Secondary structure 




















.



Template SS confidence 















































































   113......120.........130.........140.........150.........160.........170...... ...180.........190.
 
   93......100.........110.........120.........130.........140.........150.........160.........
Predicted Secondary structure 
































Query SS confidence 












































































Query Sequence  ILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAG
Query Conservation 
        
            




 
  


 
 
   
  
 


 
 
 






 





  


   
Alig confidence 












































































Template Conservation 
                      

 


  


   
   
  
 


     




 

 
 


  


  
 
Template Sequence  LMTLKADGDISVKELGDNPDRLALLFGSEKGGPSDLFEEASSASVSIPMMSQTESLNVSVSLGIALHERIDRNLAAN
Template Known Secondary structure 
TT
SGGGGGG

S

SSTT
S
GGGGGT




SSTTS


T

Template Predicted Secondary structure 
































Template SS confidence 












































































   192.......200.........210.........220.........230.........240.........250.........260........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions