Job Description P0AGJ2 Confidence 99.93% Date Thu Jan 5 11:29:18 GMT 2012 Rank 18 Aligned Residues 147 % Identity 18% Template c3dcmX_ PDB info PDB header:transferase Chain: X: PDB Molecule:uncharacterized protein tm_1570; PDBTitle: crystal structure of the thermotoga maritima spout family2 rna-methyltransferase protein tm1570 in complex with s-3 adenosyl-l-methionine Resolution 2.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.														.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		M	L	A	R	R	Q	P	D	L	T	V	C	M	E	Q	V	H	K	P	H	N	V	S	A	I	I	R	T	A	D	A	V	G	V	H	E	V	H	A	V	W	P	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	R	T	M	A	S	A	A	A	G	S	N	S	W	V	Q	.	V	K	T	H	R
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																		.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																		.	.	.	.
Template Sequence		I	K	G	K	D	G	S	I	I	S	T	A	V	T	N	L	.	.	.	.	D	V	H	D	I	A	R	T	A	R	T	Y	N	L	K	G	Y	Y	I	V	T	N	L	R	A	Q	Q	D	M	V	S	K	M	L	K	F	W	R	E	G	F	G	S	R	Y	N	P	S	R	A	E	S	L	K	L	V	K	L	K	S
Template Known Secondary structure					T	T		S										.	.	.	.												T	T		S																								T	S	G	G	G	G	T		S	S	S					T	T					S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																								.	.	.	.	.	.																													.
Query SS confidence												.	.	.																								.	.	.	.	.	.																													.
Query Sequence		T	I	G	D	A	V	A	H	L	K	.	.	.	G	Q	G	M	Q	I	L	A	T	H	L	S	D	N	A	V	D	F	R	E	I	D	Y	.	.	.	.	.	.	T	R	P	T	C	I	L	M	G	Q	E	K	T	G	I	T	Q	E	A	L	A	L	A	D	Q	D	I	I	.	I	P	M	I	G	M	V	Q	S
Query Conservation												.	.	.																								.	.	.	.	.	.																													.
Alig confidence												.	.	.																								.	.	.	.	.	.																													.
Template Conservation
Template Sequence		Y	L	E	D	V	L	E	D	I	E	S	V	E	G	E	R	P	L	I	F	F	T	S	A	K	K	R	E	N	D	I	S	F	E	E	G	R	R	I	I	I	E	T	E	K	P	V	L	I	L	L	G	T	G	W	G	L	P	D	E	I	L	E	I	S	D	Y	V	L	E	P	I	R	A	Q	S	D	F	N	H
Template Known Secondary structure		S													S	S									S	S			S	S		B														S									T	T								T	T		S			B			T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	V	S	V	A	S	A	L	I	L	Y	E	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	V	R	A	A	A	A	I	I	I	D	R	L	I
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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