Job Description P0AGJ2 Confidence 96.64% Date Thu Jan 5 11:29:18 GMT 2012 Rank 21 Aligned Residues 118 % Identity 18% Template c2yy8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0106 protein ph0461; PDBTitle: crystal structure of archaeal trna-methylase for position2 56 (atrm56) from pyrococcus horikoshii, complexed with s-3 adenosyl-l-methionine Resolution 2.48 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.
Predicted Secondary structure																					.	.																																		.	.																			.
Query SS confidence																					.	.																																		.	.																			.
Query Sequence		T	A	D	A	V	G	V	H	E	V	H	A	V	W	P	G	S	R	M	.	.	R	T	M	A	S	A	A	A	G	S	N	S	W	V	Q	V	K	T	H	R	T	I	G	D	A	V	A	H	L	K	G	Q	G	.	.	M	Q	I	L	A	T	H	L	S	D	N	A	V	D	F	R	E	I	.	D	Y	T	R	P
Query Conservation																					.	.																																		.	.																			.
Alig confidence																					.	.																																		.	.																			.
Template Conservation
Template Sequence		T	A	R	A	F	G	A	D	G	I	I	I	A	S	E	E	D	E	K	V	K	E	S	V	E	D	V	V	K	R	W	G	G	P	F	F	I	E	F	N	R	N	W	R	K	V	M	K	E	F	T	G	V	K	V	H	L	T	M	Y	G	L	H	V	D	D	V	I	E	E	L	K	E	K	L	K	K	G	E	D
Template Known Secondary structure						T	T		S					S	S	S																		S								S											S												G	G	G	T										T	T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	I	L	M	G	Q	E	K	T	G	I	T	Q	E	A	L	A	L	A	D	Q	D	I	I	I	P	M	I	G	M	V	Q	S	L	N	V	S	V	A	S	A	L	I	L	Y	E	A	Q
Query Conservation
Alig confidence											.	.																					.	.	.	.
Template Conservation											.	.																					.	.	.	.
Template Sequence		F	M	I	I	V	G	A	E	K	.	.	V	P	R	E	V	Y	E	L	A	D	Y	N	V	A	I	G	N	Q	P	H	.	.	.	.	S	E	V	A	A	L	A	V	L	L	D	R	L	L
Template Known Secondary structure								S	S		.	.										S					S	S	S	S			.	.	.	.
Template Predicted Secondary structure											.	.																					.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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