Job Description P0AGJ2 Confidence 16.26% Date Thu Jan 5 11:29:18 GMT 2012 Rank 65 Aligned Residues 80 % Identity 10% Template c2w2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-mandelate dehydrogenase; PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a. Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		H	N	V	S	A	I	I	.	.	R	T	A	D	A	V	G	V	H	E	V	H	A	V	W	P	G	S	R	M	R	T	M	A	S	A	A	A	G	S	N	S	W	V	Q	V	K	T	H	R	T	I	G	D	A	V	A	H	L	K	G	Q	G	M	Q	I	L	A	T	H	L	S	D	N	A	V	D	F	R	E	I
Query Conservation									.	.
Alig confidence									.	.									.																		.	.	.	.	.	.	.
Template Conservation																			.																		.	.	.	.	.	.	.
Template Sequence		G	A	I	Q	K	E	I	A	R	K	A	V	H	G	L	G	M	.	K	L	V	Y	Y	D	V	A	P	A	D	A	E	T	E	K	A	.	.	.	.	.	.	.	L	G	A	E	R	V	D	S	L	E	E	L	A	R	R	S	D	C	V	S	V	S	V	P	Y	M	K	L	T	H	H	L	I	D	E	A	F	F
Template Known Secondary structure		S													T	T			.							S	S										.	.	.	.	.	.	.		T					S	S									S									S	G	G	G	T	T		B
Template Predicted Secondary structure																			.																		.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.								.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		109	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	T	R	P	T	C	I	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	M	K	P	G	S	R	I	V
Template Known Secondary structure				S		T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions