Job Description P0AGJ2 Confidence 60.87% Date Thu Jan 5 11:29:18 GMT 2012 Rank 32 Aligned Residues 133 % Identity 12% Template c1z85B_ PDB info PDB header:transferase Chain: B: PDB Molecule:hypothetical protein tm1380; PDBTitle: crystal structure of a predicted rna methyltransferase (tm1380) from2 thermotoga maritima msb8 at 2.12 a resolution Resolution 2.12 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.											.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.												.
Query Sequence		A	R	R	Q	P	D	L	T	V	C	M	E	Q	V	H	K	P	H	N	V	S	A	I	I	R	T	A	D	A	V	G	V	H	E	V	H	A	V	W	P	G	S	R	M	R	T	M	A	.	.	.	.	.	.	.	.	.	.	S	A	A	A	G	S	N	S	W	V	Q	.	V	K	T	H	R	T	I	G	D	A
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.												.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.												.								.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		E	K	E	P	T	E	K	L	S	V	V	V	P	I	G	R	W	E	R	T	R	F	L	I	E	K	C	V	E	L	G	V	D	E	I	F	F	H	K	F	E	R	S	Q	H	E	I	S	L	D	K	A	K	I	V	V	R	E	A	A	K	Q	C	K	R	Y	L	F	P	K	V	S	F	L	E	K	L	.	.	.
Template Known Secondary structure						S	S																								T	T		S								T	T																						T		S	B									S	S	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	H	L	K	G	Q	G	M	Q	I	L	A	T	H	L	S	D	N	A	V	D	F	R	E	I	D	Y	T	R	P	T	C	I	L	M	G	Q	E	K	T	G	I	T	Q	E	A	L	A	L	A	D	Q	D	I	I	I	P	M	I	G	M	V	Q	S	L	N	V	S	V	A	S	A	L	I	L	Y	E	A	Q
Query Conservation
Alig confidence		.	.	.	.	.											.																								.														.	.	.	.	.	.
Template Conservation		.	.	.	.	.											.																								.														.	.	.	.	.	.
Template Sequence		.	.	.	.	.	E	F	S	G	N	V	I	T	L	D	.	L	D	A	S	Q	N	L	L	D	A	N	L	E	G	S	I	T	V	V	V	G	P	E	.	G	G	F	S	E	K	E	R	E	L	L	R	S	.	.	.	.	.	.	S	T	T	I	V	I	L	R	F	E	T	A	A	I	L	T	V	G	Y	I	A
Template Known Secondary structure		.	.	.	.	.				S							.	T	T					T	T	T	S				S	S								T	.	T												T	.	.	.	.	.	.	T	S
Template Predicted Secondary structure		.	.	.	.	.											.																								.														.	.	.	.	.	.
Template SS confidence
							145	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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