Job Description P0AGJ2 Confidence 94.72% Date Thu Jan 5 11:29:18 GMT 2012 Rank 27 Aligned Residues 144 % Identity 14% Template c1vhyB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein hi0303; PDBTitle: crystal structure of haemophilus influenzae protein hi0303, pfam2 duf558 Resolution 1.90 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	P	D	L	T	V	C	M	E	Q	V	H	K	P	H	N	V	S	A	I	I	R	T	A	D	A	V	G	V	H	E	V	H	A	V	W	P	G	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	T	M	A	S	A	A	A	G	S	N	S	W	V	Q	V	K	T	H	R	T	I	G
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		K	E	S	H	L	K	I	H	L	.	G	Q	V	I	S	R	R	X	E	F	T	I	Q	K	S	V	E	L	G	V	N	V	I	T	P	L	W	S	E	R	C	G	V	K	L	D	A	E	R	X	D	K	K	I	Q	Q	W	Q	K	I	A	I	A	A	C	E	Q	C	G	R	N	I	V	P	E	I	R	P	L	X
Template Known Secondary structure					S	S					.																		T	T										T	T	S						T	T	T	T																			T		S	S
Template Predicted Secondary structure											.
Template SS confidence
		74	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.
Predicted Secondary structure																																	.	.																																									.	.	.	.
Query SS confidence																																	.	.																																									.	.	.	.
Query Sequence		D	A	V	A	H	L	K	G	Q	G	M	Q	I	L	A	T	H	L	S	D	N	A	V	D	F	R	E	I	D	Y	T	.	.	R	P	T	C	I	L	M	G	Q	E	K	T	G	I	T	Q	E	A	L	A	L	A	D	Q	D	I	I	I	P	M	I	G	M	V	Q	S	L	N	V	S	.	.	.	.	V	A	S
Query Conservation																																	.	.																																									.	.	.	.
Alig confidence																																	.	.											.																														.	.	.	.
Template Conservation																																													.
Template Sequence		K	L	Q	D	W	C	A	E	N	D	G	A	L	K	L	N	L	H	P	R	A	H	Y	S	I	K	T	L	P	T	I	P	A	G	G	V	R	L	L	I	G	S	E	.	G	G	L	S	A	Q	E	I	A	Q	T	E	Q	Q	G	F	T	E	I	L	L	G	K	R	V	L	R	T	E	T	A	S	L	A	A	I
Template Known Secondary structure								T			S	S								T	T		S	B		T	T	T		S				T	T									T	.	T													T	T								S	S
Template Predicted Secondary structure																																													.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		155	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	L	Y	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	L	Q	I	C	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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