Job Description P0AGJ2 Confidence 30.02% Date Thu Jan 5 11:29:18 GMT 2012 Rank 42 Aligned Residues 116 % Identity 13% Template c1j6uA_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate-alanine ligase murc; PDBTitle: crystal structure of udp-n-acetylmuramate-alanine ligase2 murc (tm0231) from thermotoga maritima at 2.3 a resolution Resolution 2.30 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	P	D	L	T	V	C	M	E	Q	V	H	K	P	H	N	V	S	A	I	I	R	T	A	D	A	V	G	V	H	E	V	H	A	V	W	P	G	S	R	M	R	T	M	A	S	A	A	A	G	S	N	S	W	V	Q	V	K	T	H	R	T	I	G	D	A	V	A	H	L	K	G	Q	G	M	Q	I	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	T	N	I	Y	V	I	D	D	Y	A	H	T	P	D	E	I	R	N	L	L	Q	T	A	K	E	V	F	E	N	E	K	I	V	V	I	F	Q	P	H	R	G	N	F	A	K	A	L	Q	L	A	D	E	V	V	V	T	E	V	Y	D	S	G	K	X	I	W	D	S	L	K	S	L	G	K	E	A	Y	F
Template Known Secondary structure		T	T	T	T										S																S	S	S									B									T	T	S	S								B													T	T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		T	H	L	S	D	N	A	V	D	F	R	E	I	D	Y	T	R	P	T	C	I	L	M	G	.	Q	E	K	T	G	I	T	Q	E	A	L	A	L
Query Conservation																										.
Alig confidence														.												.
Template Conservation														.
Template Sequence		V	E	K	L	P	E	L	E	K	V	I	S	.	V	S	E	N	T	V	F	L	F	V	G	A	G	D	I	I	Y	S	S	R	R	F	V	E	R
Template Known Secondary structure				S	G	G	G							.			S	S								S	S	T
Template Predicted Secondary structure														.
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions