Return to main results Retrieve Phyre Job Id

Job DescriptionP15006
Confidence3.07%DateThu Jan 5 11:34:09 GMT 2012
Rank59Aligned Residues10
% Identity10%Templatec2k1cA_
PDB info PDB header:hydrolase/hydrolase inhibitorChain: A: PDB Molecule:capsid protein p24; PDBTitle: nmr structure of the c-terminal domain of hiv-1 capsid in complex with2 peptide inhibitor
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   201........210
Predicted Secondary structure 
Query SS confidence 









Query Sequence  YQKFLYEFCR
Query Conservation 

  
   
 
Alig confidence 









Template Conservation 
 


 

  
Template Sequence  FRDYVDRFYK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 









   161........170
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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