Job Description P0ADU2 Confidence 2.91% Date Thu Jan 5 11:21:51 GMT 2012 Rank 77 Aligned Residues 60 % Identity 8% Template c3h7hB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt5; PDBTitle: crystal structure of the human transcription elongation factor dsif,2 hspt4/hspt5 (176-273) Resolution 1.55 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	E	I	R	T	R	P	G	Q	H	H	R	Q	A	V	L	D	Q	F	A	K	I	V	P	T	V	L	K	E	E	G	C	H	G	Y	A	P	M	V	D	C	A	A	G	V	S	F	Q	S	M	A	P	D	S	I	V	M	I	E	Q	W	E	S	I	A	H	L	E	A
Query Conservation
Alig confidence													.																																			.	.	.	.	.	.	.	.	.
Template Conservation													.																																			.	.	.	.	.	.	.	.	.
Template Sequence		L	W	T	V	K	C	K	I	G	E	E	.	R	A	T	A	I	S	L	M	R	K	F	I	A	Y	Q	F	T	D	T	P	L	Q	I	K	S	V	V	A	P	E	H	V	K	G	.	.	.	.	.	.	.	.	.	Y	I	Y	V	E	A	Y	K	Q	T	H	V	K	Q	A
Template Known Secondary structure									T	T			.															T	T	S	S	S											T	T			S	.	.	.	.	.	.	.	.	.							S	S
Template Predicted Secondary structure													.																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.										.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions