Job Description P0ADU2 Confidence 1.87% Date Thu Jan 5 11:21:51 GMT 2012 Rank 89 Aligned Residues 60 % Identity 13% Template c2exuA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription initiation protein spt4/spt5; PDBTitle: crystal structure of saccharomyces cerevisiae transcription elongation2 factors spt4-spt5ngn domain Resolution 2.23 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		I	A	E	I	R	T	R	P	G	Q	H	H	R	Q	A	V	L	D	Q	F	A	K	I	V	P	T	V	L	K	.	.	E	E	G	C	H	G	Y	A	P	M	V	D	C	A	A	G	V	S	F	Q	S	M	A	P	D	S	I	V	M	I	E	Q	W	E	S	I	A	H	L	E	A
Query Conservation																															.	.
Alig confidence													.																		.	.																		.	.	.	.	.	.	.	.	.
Template Conservation													.																																					.	.	.	.	.	.	.	.	.
Template Sequence		I	W	G	V	R	C	R	P	G	K	E	.	K	E	L	I	R	K	L	L	K	K	K	F	N	L	D	R	A	M	G	K	K	K	L	K	I	L	S	I	F	Q	R	D	N	Y	T	G	.	.	.	.	.	.	.	.	.	R	I	Y	I	E	A	P	K	Q	S	V	I	E	K	F
Template Known Secondary structure									T	T			.																		S		S	S											T	T	S	T	T	.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure													.																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.										.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions