Return to main results Retrieve Phyre Job Id

Job DescriptionP75786
Confidence5.66%DateWed Jan 25 15:21:02 GMT 2012
Rank9Aligned Residues23
% Identity43%Templatec2g9lA_
PDB info PDB header:antibioticChain: A: PDB Molecule:gaegurin-4; PDBTitle: the high-resolution solution conformation of an2 antimicrobial peptide gaegurin 4 and its mode of membrane3 interaction
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.......
Predicted Secondary structure 







Query SS confidence 






















Query Sequence  GQLLTNKSFAKGIANPTKSGVFQ
Query Conservation 






















Alig confidence 






















Template Conservation 






















Template Sequence  GILDTLKQFAKGVGKDLVKGAAQ
Template Known Secondary structure 
TTTTTS
Template Predicted Secondary structure 
Template SS confidence 






















   1........10.........20...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions