Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFW8
Confidence3.40%DateThu Jan 5 11:27:27 GMT 2012
Rank78Aligned Residues26
% Identity15%Templated1ljoa_
SCOP infoSm-like fold Sm-like ribonucleoproteins Sm motif of small nuclear ribonucleoproteins, SNRNP
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30. ........40...
Predicted Secondary structure 


.


Query SS confidence 













.











Query Sequence  LACQHHLMLTLELK. DGEKLQAKASDL
Query Conservation 


       
 
 .

    
 
 
 
Alig confidence 













.











Template Conservation 
       
 
 

 

    
 
   
Template Sequence  VKSMVGKIIRVEMKGEENQLVGKLEGV
Template Known Secondary structure  TTTSTT
SS
Template Predicted Secondary structure 




Template SS confidence 


























   10.........20.........30......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions