Job Description P0AFW8 Confidence 37.71% Date Thu Jan 5 11:27:27 GMT 2012 Rank 7 Aligned Residues 53 % Identity 15% Template c3swnC_ PDB info PDB header:rna binding protein Chain: C: PDB Molecule:u6 snrna-associated sm-like protein lsm7; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings Resolution 2.50 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.														.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	L	A	C	Q	H	H	L	M	L	T	L	E	L	K	D	G	E	K	L	Q	A	K	A	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	S	R	K	N	V	E	Y	L	V	V	E	A	A	G	E	T	R	E	L	R	L	D	K	I	T	S	F	S
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		L	D	L	S	R	Y	Q	D	Q	R	I	Q	A	T	F	T	G	G	R	Q	I	T	G	I	L	K	G	F	D	Q	L	M	N	L	V	L	D	D	V	E	E	Q	L	R	L	T	G	A	I	R	K	L	.	.	.	.	G	L	V	V	V	R	G	T	T	L	V	L	I	A
Template Known Secondary structure					T	T	S	T	T	S							T	T	S												T	T																S						.	.	.	.							T	T	T
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions