Job Description P0AFW8 Confidence 5.91% Date Thu Jan 5 11:27:27 GMT 2012 Rank 52 Aligned Residues 34 % Identity 21% Template c3mlqH_ PDB info PDB header:transferase/transcription Chain: H: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of the thermus thermophilus transcription-repair2 coupling factor rna polymerase interacting domain with the thermus3 aquaticus rna polymerase beta1 domain Resolution 2.91 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		K	L	Q	A	K	A	S	D	L	V	S	R	K	N	V	E	Y	L	V	V	E	A	A	G	E	T	R	E	.	L	R	L	D	K	I
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		Q	Y	L	G	L	E	T	R	E	V	L	G	V	K	R	D	Y	L	V	L	R	Y	K	G	E	G	K	L	Y	L	P	V	E	Q	L
Template Known Secondary structure												S	S											T	T	S									S
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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