Job Description P0AFW8 Confidence 13.30% Date Thu Jan 5 11:27:27 GMT 2012 Rank 28 Aligned Residues 31 % Identity 16% Template c3hsbB_ PDB info PDB header:rna binding protein/rna Chain: B: PDB Molecule:protein hfq; PDBTitle: crystal structure of ymah (hfq) from bacillus subtilis in complex with2 an rna aptamer Resolution 2.20 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	D	N	L	E	L	A	C	Q	H	H	L	M	L	T	L	E	L	K	D	G	E	K	L	Q	A	K	A	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D	Q	F	L	N	Q	I	R	K	E	N	T	Y	V	T	V	F	L	L	N	G	F	Q	L	R	G	Q	V	K	G
Template Known Secondary structure												T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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