Job Description P0AFW8 Confidence 20.37% Date Thu Jan 5 11:27:27 GMT 2012 Rank 15 Aligned Residues 61 % Identity 11% Template c1b34B_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:protein (small nuclear ribonucleoprotein sm d2); PDBTitle: crystal structure of the d1d2 sub-complex from the human snrnp core2 domain Resolution 2.50 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.
Predicted Secondary structure																																.	.	.																														.
Query SS confidence																																.	.	.																														.
Query Sequence		D	N	L	E	L	A	C	Q	H	H	L	M	L	T	L	E	L	K	D	G	E	K	L	Q	A	K	A	S	D	L	.	.	.	V	S	R	K	N	V	E	Y	L	V	V	E	A	A	G	E	T	R	E	L	R	L	D	K	I	T	S	F	S	.	H	P
Query Conservation																																.	.	.																														.
Alig confidence																																.	.	.																														.
Template Conservation
Template Sequence		S	V	L	T	Q	S	V	K	N	N	T	Q	V	L	I	N	C	R	N	N	K	K	L	L	G	R	V	K	A	F	D	R	H	C	N	M	V	L	E	N	V	K	E	M	D	R	Y	I	S	K	M	F	L	R	G	D	S	V	I	V	V	L	R	N	P
Template Known Secondary structure											T								T	T	S												T	T																						G	G	G
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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