|   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
. | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
Query Sequence |   |
G | R | A | S | F | G | G | Q | I | I | T | V | K | C | F | E | D | N | G | L | L | Y | D | L | L | E | Q | N | G | R | G | R | V | L | V | V | D | G | G | G | S | V | R | R | A | L | V | D | A | E | L | A | R | L | A | V | Q | N | E | W | E | G | L | V | I | Y | G | A | V | R | Q | V | D | D | L | . |
. |
. |
E | E |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|   |
|
|
|   |   |   |
| . | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
Template Conservation |   |
|   |
|   |
|   |
|   |
|   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|
|
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
S | P | G | A | A | V | G | Q | V | V | F | . |
. |
. |
. |
. |
. |
T | A | E | D | A | E | A | W | H | S | Q | G | K | A | A | I | L | V | R | A | E | T | S | P | E | D | V | G | G | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | A | A | V | G | I | L | T | E | R | G | G | M | T | S | H | A | A | V | V | A | R | G |
Template Known Secondary structure |   |
 |
| S |  |  |  |  |  |  |  | S | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | S |
|
|
| T | T | S |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  | S | S |  |  |  |  | S | S |
|
| T | T | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
402 | . | . | . | . | . | . | . | 410 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . |
  |
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
. | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |
| . |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
L | D | I | G | I | Q | A | M | A | A | I | P | V | G | A | A | G | E | G | I | G | E | S | D | V | R | V | N | F | G | G | V | T | F | F | S | G | D | H | L | Y | A | D | . |
N | T | G | I | I | L | S |
Query Conservation |   |
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |
|   |
|
|
|   |
|   |
|
| . |   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
| . | . | . | . | . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|
|
|
|   |   |
|   |
|   |   |
Template Sequence |   |
W | G | K | C | C | V | . |
. |
. |
. |
. |
. |
S | G | C | S | G | I | R | V | N | D | A | E | K | L | V | T | I | G | G | H | V | L | R | E | G | E | W | L | S | L | N | G | S | T | G | E | V | I | L |
Template Known Secondary structure |   |
T | T |
|
|  |  | . | . | . | . | . | . |  |
|
| T | T |  |  |  |  | G | G | G | T |  |  |  |  | T | T |  |  |  |  | T | T |
|  |  |  |  |  | T | T | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
466 | . | . | . | 470 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 |
  |