Job Description P0A8R0 Confidence 100.00% Date Thu Jan 5 11:08:32 GMT 2012 Rank 10 Aligned Residues 159 % Identity 19% Template c2c5qE_ PDB info PDB header:structural genomics,unknown function Chain: E: PDB Molecule:rraa-like protein yer010c; PDBTitle: crystal structure of yeast yer010cp Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure														.	.	.	.															.	.																		.	.																													.
Query SS confidence														.	.	.	.															.	.																		.	.																													.
Query Sequence		M	K	Y	D	T	S	E	L	C	D	I	Y	.	.	.	.	Q	E	D	V	N	V	V	E	P	L	F	S	N	F	.	.	G	G	R	A	S	F	G	G	Q	I	I	T	V	K	C	F	E	.	.	D	N	G	L	L	Y	D	L	L	E	Q	N	G	R	G	R	V	L	V	V	D	G	G	G	S	V	R	R	.
Query Conservation														.	.	.	.															.	.																		.	.																													.
Alig confidence														.	.	.	.															.	.																		.	.																													.
Template Conservation
Template Sequence		Q	R	F	S	T	C	D	I	S	D	G	L	L	N	V	Y	N	I	P	T	G	G	Y	F	P	N	L	T	A	I	S	P	P	Q	N	S	S	I	V	G	T	A	Y	T	V	L	F	A	P	I	D	D	P	R	P	A	V	N	Y	I	D	S	V	P	P	N	S	I	L	V	L	A	L	E	P	H	L	Q	S	Q
Template Known Secondary structure		T	T	S																T	T	T	T				S								S	S	S														T	T	S	S	S						G	G	G			T	T									G	G	G	B		S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
											72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																	.															.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																	.															.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	A	L	V	D	A	E	L	A	R	L	A	V	Q	N	E	W	E	G	L	V	I	Y	G	A	V	R	Q	V	D	D	L	E	E	L	D	I	G	I	Q	A	M	A	A	I	P	V	G	A	.	A	G	E	G	I	G	E	S	D	V	R	V	N	F	.	.	.	.	G	G	V	T
Query Conservation		.	.	.	.	.	.	.	.	.																																																	.															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																	.															.	.	.	.
Template Conservation
Template Sequence		F	H	P	F	I	K	I	T	Q	A	M	Y	G	G	L	M	S	T	R	A	Q	Y	L	K	S	N	G	T	V	V	F	G	R	I	R	D	V	D	E	H	R	T	L	N	H	P	V	F	A	Y	G	V	G	S	C	A	P	K	A	V	V	K	A	V	G	T	N	V	Q	L	K	I	L	T	S	D	G	V	T	Q
Template Known Secondary structure		S	T	T		B	S			S		S												T	T																				T										S	S		S	T	T	T							S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	S	G	D	H	L	Y	A	D	N	T	G	I	I	L	S	E	D	P	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	P	G	D	Y	I	A	G	D	N	N	G	I	V	R	I	P	V	Q	E	T
Template Known Secondary structure												T	T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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