 |
Job Description | P37690 | Confidence | 52.86% | Date | Thu Jan 5 11:57:02 GMT 2012 |
Rank | 169 | Aligned Residues | 64 |
% Identity | 19% | Template | d2ijob1 |
SCOP info | Trypsin-like serine proteases
| Trypsin-like serine proteases
| Viral proteases
|
Resolution | 2.30 |
|
 |
  |   |
297 | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | |
. | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | F | W | P | V | R | G | P | T | L | H | R | Y | G | E | Q | L | Q | G | E | L | R | W | K | G | M | V | I | . |
G | A | S | E | G | T | E | V | K | A | I | A | D | G | R | V | I | L | A | D | W | L | Q | G | Y | G | L | V | V | V | V | E | H | G | K | G | D | M | S | L | Y | G |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
| . |   |   |   |   |
|   |   |
|   |
|   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |
|   |   |
|
|
|   |
|
|   |   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |
|   |   |
|
|
|
|   |
|
|   |
|   |
|
|
|
|
|
|
|   | . |   |   |   |
|   |
|
| . | . | . | . | . |
|
|
|
|
|
|
|   |   |
|   |   |   | . |
|   |
|   |
|
|
Template Sequence |   |
P | G | R | N | V | K | N | V | Q | T | K | P | G | V | F | K | T | P | E | G | E | I | G | A | V | T | L | D | F | P | T | G | T | S | G | S | P | I | V | . |
D | K | N | G | D | V | I | . |
. |
. |
. |
. |
G | L | Y | G | N | G | V | I | M | P | N | G | S | . |
Y | I | S | A | I | V |
Template Known Secondary structure |   |
T | T | S |
|
|  |  |  |  |  |
|
|  |  |  |  |
| S | S |
|  |  |  |  |  |
|
|
|
|
| T | T |
| T | T |
|  |  |  | . |
| T | T | S |
|  |  | . | . | . | . | . |  |  |
|
|
|  |  |  |
| T | T | S |
| . |  |  |  |  |
| B |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  | . |
|
|
|
|
|  |  | . | . | . | . | . |  |  |  |  |
|  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
. | . | . | . | . | . | . | |
|
|
|
|
. | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
. | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|