|   |
278 | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | |
|
|
|
. | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | |
|
|
|
. | . | 340 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | S | E | K | S | L | M | S | R | T | G | G | L | G | A | P | R | G | Q | A | F | W | P | V | R | G | P | T | L | H | R | Y | G | E | Q | L | Q | . |
. |
. |
. |
G | E | L | R | W | K | G | M | V | I | G | A | S | E | G | T | E | V | K | A | I | A | . |
. |
. |
. |
D | G | R | V | I | L | A | D | W | L | Q | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . |   |   |   |   |   |   |
|
|
|
|   |   |   |   |
|   |   |
|   |
|   |   | . | . | . | . |   |
|   |
|   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|   |   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |
Template Sequence |   |
V | P | V | G | S | E | P | R | R | N | G | G | Y | L | G | V | F | D | S | D | V | Y | N | N | S | A | Q | T | V | A | V | E | F | D | T | L | S | N | S | G | W | D | P | S | M | K | H | I | G | I | D | V | N | S | I | K | S | I | A | T | V | S | W | D | L | A | N | G | E | N | A | E | I | L | I | T | Y | N | A | A |
Template Known Secondary structure |   |
 |  | T | T |
|
|
|
|
|
| G | G | G | T | T | T |
| S |
| S | S |
|
| G | G | G |
|
|  |  |  |  |  |  |
| S |
|
| T | T | T |
|
| S | S |
|  |  |  |  |  |  | S | S | S | S |
| S |  |  |  |  |
|
|
|
| T | T | S |
|  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
  |   |
350 | . | . | . | |
. | . | . | . | . | |
. | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  | . |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | G | L | V | . |
V | V | V | E | H | . |
G | K | G | D | M | S | L | Y | G | Y | N | Q | S | A | L | V | S | V | G | S | Q | V | R | A | G | Q | P | I | A | L | V | G | S | S | G | G | Q | G | R | P | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | Y | F | E | I | R | R | Q | G | Q | A | V | N | P | Q | P | W |
Query Conservation |   |
  |
|   |   | . |
|
|
|   |
| . |
|   |   |   |   |
|
|
|   |   |
|   |   |
|   |
|   |   |
|
|   |
|   |   |
|
|   |
|
|   |
|
|   |
|
|   |
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |   |   |
|   |   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |   | . | . | . | . |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
Template Sequence |   |
T | S | L | L | V | A | S | L | V | H | P | S | R | R | T | S | Y | I | L | S | E | R | V | D | I | T | N | E | L | P | E | Y | V | . |
. |
. |
. |
S | V | G | F | S | A | T | T | G | L | S | E | G | Y | I | E | T | H | D | V | L | S | W | S | F | A | S | K | L | P | D | D | S | T | A | E | P | L | D | L | A | S | Y |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |  |
|
|  |  |  |  | S |
| S |  |  | . | . | . | . |  |  |  |  |  |  |  |  |
| S | S | T | T | B |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|
|
|
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
|
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . |
  |
  |   |
417 | . | . |
Predicted Secondary structure |   |
|
|
|
Query SS confidence |   |
|
|
|
Query Sequence |   |
L | G | R |
Query Conservation |   |
|   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
  |   |   |
Template Sequence |   |
L | V | R |
Template Known Secondary structure |   |
 |  |  |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
248 | . | 250 |
  |