Job Description P37690 Confidence 39.92% Date Thu Jan 5 11:57:02 GMT 2012 Rank 204 Aligned Residues 170 % Identity 10% Template d1jmma_ SCOP info Supersandwich V-region of surface antigen I/II (SA I/II, PAC) V-region of surface antigen I/II (SA I/II, PAC) Resolution 2.40

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		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	S	I	A	R	A	E	A	A	A	K	A	R	A	E	R	E	A	R	E	A	Q	A	V	R	D	R	Q	K	E	A	T	R	K	G	T	T	Y	K	P	T	E	S	E	K	S	L	M	S	R	T	G	G	L	G	A	P	R	G	Q	A	F	W	P	V	R	G	P	T	L	H	R	Y	G	E	Q	L	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	D	L	A	D	Y	P	V	K	L	K	A	Y	E	D	E	Q	A	S	I	K	A	A	L	A	E	L	E	K	H	K	N	E	D	G	N	L	T	E	P	S	A	Q	N	L	V	Y	D	L	E	P	N	A	N	L	S	L	T	T	D	G	K	F	L	K	A	S	A	V	D	D	A	F	S	K	S	T	S	K
Template Known Secondary structure			T																											T	T	T	T	T	S	T	T	S	B	S	S				B					S			T	T								S	S														S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.																		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	R	W	K	G	M	V	I	G	A	S	E	G	T	E	V	K	A	I	A	D	G	R	V	I	L	A	D	W	L	Q	G	Y	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	V	V	E	H	G	K	G	D	M	S	L	Y	G	Y	N	Q	S	A	L	V	S	V	G	S	Q
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																																														.
Template Sequence		A	K	Y	V	Q	K	I	L	Q	L	D	D	L	D	I	T	N	L	E	Q	S	N	D	V	A	S	S	X	E	L	Y	G	N	F	G	D	K	A	G	W	S	T	T	V	S	N	N	S	Q	V	K	W	G	S	V	L	L	E	R	G	Q	S	A	T	A	T	Y	T	N	L	Q	N	S	Y	Y	N	.	G	K	K
Template Known Secondary structure						T	T				G	G	G			G	G	G	G		S	G	G	G			S	S						T	T	S	T	T	S	S				T	T	T	B	T	S											T	T											S	S				T	.	T
Template Predicted Secondary structure																																																																														.
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.		620	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	A	G	Q	P	I	A	L	V	G	S	S	G	G	Q	G	R	P	S	L	Y	F	E	I	R	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	K	I	V	Y	K	Y	T	V	D	P	K	S	K	F	Q	G	Q	K	V	W	L	G	I	F	T	D
Template Known Secondary structure													T	T				S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions