Job Description P37690 Confidence 95.50% Date Thu Jan 5 11:57:02 GMT 2012 Rank 37 Aligned Residues 211 % Identity 9% Template c3r6nA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:desmoplakin; PDBTitle: crystal structure of a rigid four spectrin repeat fragment of the2 human desmoplakin plakin domain Resolution 2.95 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		R	D	Q	L	K	S	I	Q	A	D	I	A	A	K	E	R	A	V	R	Q	K	Q	Q	Q	R	A	S	L	L	A	Q	L	K	K	Q	E	E	A	I	S	E	A	T	R	K	L	R	E	T	Q	N	T	.	L	N	Q	L	N	K	Q	I	D	E	M	N	A	S	I	A	K	L	E	Q	Q	K	A	A	Q	E	R
Query Conservation																																																						.
Alig confidence																																																						.
Template Conservation
Template Sequence		K	S	A	I	Y	Q	L	E	E	E	Y	E	N	L	L	K	A	S	F	E	R	M	D	H	L	R	Q	L	Q	N	I	I	Q	A	T	S	R	E	I	M	W	I	N	D	C	E	E	E	E	L	L	Y	D	W	S	D	K	N	T	N	I	A	Q	K	Q	E	A	F	S	I	R	M	S	Q	L	E	V	K	E	K
Template Known Secondary structure																																																				S				S	T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	A	Q	L	D	A	A	F	R	Q	G	E	H	T	G	I	Q	L	I	L	S	G	E	E	S	Q	R	G	Q	R	L	Q	A	Y	F	G	Y	L	N	Q	A	R	Q	E	T	I	A	Q	L	K	Q	T	R	E	E	V	A	M	Q	R	A	E	L	E	E	K	Q	S	E	Q	Q	T	L	L	Y	E	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	N	K	L	K	Q	E	S	D	Q	L	V	L	N	Q	H	P	A	S	D	K	I	E	A	Y	M	D	T	L	Q	T	Q	W	S	W	I	L	Q	I	T	K	C	I	D	V	H	L	K	E	N	A	A	Y	F	Q	F	F	E	E	A	Q	S	T	E	A	Y	L	K	G	L	Q	D	S	I	R	K	K	Y	P
Template Known Secondary structure																T	T		T	T																																																												S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	Q	A	K	L	T	Q	A	L	N	E	R	K	K	T	L	A	G	L	E	S	S	I	Q	Q	G	Q	Q	Q	L	S	E	L	R	A	N	E	S	R	L	R	N	S	I	A	R	A	E	A	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	D	K	N	M	P	L	Q	H	L	L	E	Q	I	K	E	L	E	K	E	R	E	K	I	L	E	Y	K	R	Q	V	Q	N	L	V	N	K	S	K	K	I	V	Q	L	K	P	R	N	P	D	Y	R
Template Known Secondary structure				T	T																																			T	T					G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions