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Job DescriptionP37690
Confidence54.99%DateThu Jan 5 11:57:02 GMT 2012
Rank161Aligned Residues147
% Identity15%Templatec3o0pA_
PDB info PDB header:transferase , hydrolaseChain: A: PDB Molecule:sortase family protein; PDBTitle: pilus-related sortase c of group b streptococcus
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  NSIARAEAAAKARAEREAREAQAVRDRQKEATRKGTTYKPTESEKSLMSRTGGLGAPRGQAFWPVRGPTLHRYGEQLQGE
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Template Sequence  QDFERAAKKLSQKEINRRMALAQAYNDSLNNVHLEDPYEKKRIGIAEYARMLEVSEKIGIISVP. . . . . . . . . . . . . . . .
Template Known Secondary structure  TS
T

GGG


TT
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TTGGG
BTTBSG................
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   4950.........60.........70.........80.........90.........100.........110..
 
   318.320.........330.........340....... ..350........ .360.........370.........380.........390..
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Query Sequence  LRWKGMVIGASEGTEVKAIADGRVILADWL. . . . QGYGLVVVVEH. GKGDMSLYGYNQSALVSVGSQVRAGQPIALVGSS
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Template Sequence  . . KIGQKLPIFAGSSQEVLSKGAGHLEGTSLPIGGNSTHTVITAHSGIPDKELFSNLKK. . LKKGDKF. . . . YIQNIKET
Template Known Secondary structure  ..GGTSS

TTS
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S

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TTTTGGG..

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   115....120.........130.........140.........150.........160.........170. ....... .180......
 
   393......400.........410......
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Query Sequence  GGQGRPSLYFEIRRQGQAVNPQPW
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Template Sequence  . . . . . . . IAYQVD. QIKVVTPDNF
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TT

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   187..190.. .......200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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