|   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | S | I | A | R | A | E | A | A | A | K | A | R | A | E | R | E | A | R | E | A | Q | A | V | R | D | R | Q | K | E | A | T | R | K | G | T | T | Y | K | P | T | E | S | E | K | S | L | M | S | R | T | G | G | L | G | A | P | R | G | Q | A | F | W | P | V | R | G | P | T | L | H | R | Y | G | E | Q | L | Q | G | E |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
Q | D | F | E | R | A | A | K | K | L | S | Q | K | E | I | N | R | R | M | A | L | A | Q | A | Y | N | D | S | L | N | N | V | H | L | E | D | P | Y | E | K | K | R | I | G | I | A | E | Y | A | R | M | L | E | V | S | E | K | I | G | I | I | S | V | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |
|
|
| T | T |
| T | T |
|
|
|
|
|
| T | T | G | G | G |
| B | T | T | B | S |  |  |  |  |  | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
318 | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | |
|
|
|
. | . | 350 | . | . | . | . | . | . | . | . | |
. | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | W | K | G | M | V | I | G | A | S | E | G | T | E | V | K | A | I | A | D | G | R | V | I | L | A | D | W | L | . |
. |
. |
. |
Q | G | Y | G | L | V | V | V | V | E | H | . |
G | K | G | D | M | S | L | Y | G | Y | N | Q | S | A | L | V | S | V | G | S | Q | V | R | A | G | Q | P | I | A | L | V | G | S | S |
Query Conservation |   |
  |   |   |   |
|
|
|
|   |   |   |   |
|   |   |
|   |
|   |   |   |
|   |
|   |   |
|   |   |   | . | . | . | . |   |
|   |
|   |   |
|
|
|   |
| . |
|   |   |   |   |
|
|
|   |   |
|   |   |
|   |
|   |   |
|
|   |
|   |   |
|
|   |
|
|   |
|
|   |
|
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   | . | . |
|   |   |
|
|   |
| . | . | . | . |   |
|   |   |   |   |   |   |
Template Sequence |   |
. |
. |
K | I | G | Q | K | L | P | I | F | A | G | S | S | Q | E | V | L | S | K | G | A | G | H | L | E | G | T | S | L | P | I | G | G | N | S | T | H | T | V | I | T | A | H | S | G | I | P | D | K | E | L | F | S | N | L | K | K | . |
. |
L | K | K | G | D | K | F | . |
. |
. |
. |
Y | I | Q | N | I | K | E | T |
Template Known Secondary structure |   |
. | . | G | G | T |  |  |  |  |  |  | S | S |
|
|  |  |  |  | T | T | S |  |  |  |
| T | T | S |
|
| S | S |
|
| T | T |  |  |  |  |  |  |
|
| S |
|
| T | T |
|
| T | T | T | T | G | G | G | . | . |
|
| T | T |
|  |  | . | . | . | . |  |  |  |
| S | S |
|  |
Template Predicted Secondary structure |   |
. | . |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|  |  |  | . | . |
|
|
|
|
|  |  | . | . | . | . |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | |
|
. | . | . | . | . | . | . | |
|
|
|
. | 180 | . | . | . | . | . | . |
  |
  |   |
393 | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | Q | G | R | P | S | L | Y | F | E | I | R | R | Q | G | Q | A | V | N | P | Q | P | W |
Query Conservation |   |
|   |
|   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |
|
|
|   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . |
|   |
|   |
|   | . |   |   |   |   |
|   |
|   |
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
I | A | Y | Q | V | D | . |
Q | I | K | V | V | T | P | D | N | F |
Template Known Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  | . |  |  |  |  |  |
| T | T |
|
|
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
187 | . | . | 190 | . | . | |
. | . | . | . | . | . | . | 200 | . | . |
  |