Job Description P37690 Confidence 84.73% Date Thu Jan 5 11:57:02 GMT 2012 Rank 83 Aligned Residues 232 % Identity 13% Template c2nrjA_ PDB info PDB header:toxin Chain: A: PDB Molecule:hbl b protein; PDBTitle: crystal structure of hemolysin binding component from2 bacillus cereus Resolution 2.03 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		V	K	P	R	R	F	A	I	R	P	I	I	Y	A	S	V	L	S	A	G	V	L	L	C	A	F	S	A	H	A	D	E	R	D	Q	L	K	S	I	Q	A	D	I	A	A	K	E	R	A	V	R	Q	K	Q	Q	Q	R	A	S	L	L	A	Q	L	K	K	Q	E	E	A	I	.	.	.	.	S	E	A	T	R
Query Conservation																																																																									.	.	.	.
Alig confidence																																					.																																				.	.	.	.
Template Conservation																																					.
Template Sequence		V	K	K	Q	L	L	D	T	L	N	G	I	V	E	Y	D	T	T	F	D	N	Y	Y	E	T	X	V	E	A	I	N	T	G	D	G	.	E	T	L	K	E	G	I	T	D	L	R	G	E	I	Q	Q	N	Q	K	Y	A	Q	Q	L	I	E	E	L	T	K	L	R	D	S	I	G	H	D	V	R	A	F	G	S
Template Known Secondary structure																																		T			.
Template Predicted Secondary structure																																					.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	R	E	T	Q	N	T	L	N	Q	L	N	K	Q	I	D	E	M	N	A	S	I	A	K	L	E	Q	Q	K	A	A	Q	E	R	S	L	A	A	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A	F	R	Q	G	E	H	T	G	I	Q	L	I	L	S	G	E	E	S	Q	R
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	K	E	L	L	Q	S	I	L	K	N	Q	G	A	D	V	D	A	D	Q	K	R	L	E	E	V	L	G	S	V	N	Y	Y	K	Q	L	E	G	F	N	V	X	K	G	A	I	L	G	L	P	I	I	G	G	I	I	V	G	V	A	R	D	N	L	G	K	L	E	P	L	L	A	E	L	R	Q	T	V	D	Y
Template Known Secondary structure													T	T														T	G	G	G		G	G	G						G	G	G	T	S								T	T	T							G	G	G													S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		G	Q	R	L	Q	A	Y	F	G	Y	L	N	Q	A	R	Q	E	T	I	A	Q	L	K	Q	T	R	E	E	V	A	M	Q	R	A	E	L	E	E	K	Q	S	E	Q	Q	T	L	L	Y	E	Q	R	A	Q	Q	A	K	L	T	Q	A	L	.	N	E	R	K	K	T	L	A	G	L	E	S	S	I	Q	Q	G	Q
Query Conservation																																																															.
Alig confidence																																																															.
Template Conservation
Template Sequence		K	V	T	L	N	R	V	V	G	V	A	Y	S	N	I	N	E	X	H	K	A	L	D	D	A	I	N	A	L	T	Y	X	S	T	Q	W	H	D	L	D	S	Q	Y	S	G	V	L	G	H	I	E	N	A	A	Q	K	A	D	Q	N	K	F	K	F	L	K	P	N	L	N	A	A	K	D	S	W	K	T	L	R
Template Known Secondary structure																																																							T	T			S	T	T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	L	S	E	L	R	A	N	E	S	R	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	A	V	T	L	K	E	G	I	K	E	L	K
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions