Job Description P37690 Confidence 29.13% Date Thu Jan 5 11:57:02 GMT 2012 Rank 264 Aligned Residues 56 % Identity 18% Template c2j98A_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:replicase polyprotein 1ab; PDBTitle: human coronavirus 229e non structural protein 9 cys69ala2 mutant (nsp9) Resolution 1.8 Å

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370						.	.	.	.	.	.	.	.	.	380	.													.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																	.																						.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																						.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	A	D	G	R	V	I	L	A	D	W	L	Q	G	.	Y	G	L	V	V	V	V	E	H	G	K	G	D	M	S	L	Y	G	Y	N	Q	.	.	.	.	.	S	A	L	V	S	V	G	S	Q	V	R	.	.	.	.	.	.	.	.	.	.	.	.	A	G	Q	P	I	A	L	V	G	S	S
Query Conservation																	.																						.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.														.	.							.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.
Template Sequence		N	E	G	G	R	A	F	M	Y	A	Y	V	T	T	K	P	G	M	K	Y	V	K	W	E	H	D	S	G	V	.	.	V	T	V	E	L	E	P	P	A	R	F	V	I	D	T	P	T	G	P	Q	I	K	Y	L	Y	F	V	K	N	L	N	N	L	R	R	G	A	V	L	G	Y	I	G	A	T
Template Known Secondary structure				S	S	S									S		S														.	.					B											T	T										B	T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions