Job Description P37690 Confidence 36.03% Date Thu Jan 5 11:57:02 GMT 2012 Rank 221 Aligned Residues 157 % Identity 19% Template c2hpcH_ PDB info PDB header:blood clotting Chain: H: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of fragment d from human fibrinogen complexed with2 gly-pro-arg-pro-amide. Resolution 2.90 Å

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		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	T	L	A	G	L	E	S	S	I	Q	Q	G	Q	Q	Q	L	S	E	L	R	A	N	E	S	R	L	R	N	S	I	A	R	A	E	A	A	A	K	A	R	A	E	R	E	A	R	E	A	Q	A	V	R	D	R	Q	K	E	A	T	R	K	G	T	T	Y	K	P	T	E	S	E	K	S	L	M	S	R	T
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	V	N	S	N	I	P	T	N	L	R	V	L	R	S	I	L	E	N	L	R	S	K	I	Q	K	L	E	S	D	V	S	A	Q	M	E	Y	C	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	C	T	V	S	C	N	I	P	V	V	S
Template Known Secondary structure		T	T	T	T	T	T	T								T								T	T	T	T	T	T	T	S								T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.																												.	.	.	.	.	200	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.					.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																																									.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	L	G	A	P	R	G	Q	A	F	W	P	V	R	G	P	T	L	H	R	Y	G	E	Q	L	Q	G	E	L	R	W	K	G	M	V	I	G	A	S	E	G	T	E	V	K	A	I	A	D	G	R	V	I	L	.	.	.	.	A	D	W	L	Q	G	Y	G	L	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																									.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	E	C	E	E	I	I	R	K	G	G	E	T	S	E	M	Y	L	I	Q	P	D	S	S	V	K	P	Y	R	V	Y	C	D	M	N	T	E	N	G	G	W	T	V	I	Q	N	R	Q	D	G	S	V	D	F	G	R	K	W	D	P	Y	K	Q	G	F	G	N	V	A	T	N	T	D	G	K	N	Y	C	G
Template Known Secondary structure			S	S						T	T	T			S		S							S	T	T	S										S	S	S	S	S									S	S	S	S	S																S					T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
																							353	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	V	V	E	H	.	.	.	.	G	K	G	D	M	S	L	Y	G	Y	N	Q	S	A	L	V	S	V	G	S	Q	V	R	A	G	Q	P	I	A	L	V	G	S	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation
Template Sequence		L	P	G	E	Y	W	L	G	N	D	K	I	S	Q	L	T	R	M	G	P	T	E	L	L	I	E	M	E	D	W	K	G	D	K	V	K	A	H	Y	G	G	F	T	V	Q	N	E	A	N	K	Y	Q	I	S	V	N	K	Y	R	G	T	A	G	N	A
Template Known Secondary structure																	T	T	S	S	S	B									T	T	S															T	T	T	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions