Job Description P37690 Confidence 80.76% Date Thu Jan 5 11:57:02 GMT 2012 Rank 106 Aligned Residues 91 % Identity 23% Template c2aujD_ PDB info PDB header:transferase Chain: D: PDB Molecule:dna-directed rna polymerase beta' chain; PDBTitle: structure of thermus aquaticus rna polymerase beta'-subunit2 insert Resolution 2.70 Å

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		297	.	.	300	.	.	.	.											.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence										.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		Q	A	F	W	P	V	R	G	.	.	.	.	.	.	.	.	.	.	P	T	L	H	R	Y	G	E	Q	L	Q	G	E	L	R	W	K	G	M	.	V	I	G	A	S	E	G	T	E	V	K	A	I	A	D	G	R	V	I	L	A	D	W	L	Q	G	Y	G	L	V	V	V	V	E	H	G	K	G	D	M	S	L
Query Conservation										.	.	.	.	.	.	.	.	.	.																				.
Alig confidence										.	.	.	.	.	.	.	.	.	.																				.																										.	.
Template Conservation																																																																	.	.
Template Sequence		L	Y	R	F	P	R	R	V	R	V	D	Y	L	R	K	E	R	A	A	L	R	I	P	L	S	A	W	V	E	K	E	A	Y	R	P	G	E	V	L	A	E	L	S	E	P	Y	L	F	R	A	E	E	S	G	V	V	E	L	K	D	L	A	E	.	.	G	H	L	I	Y	L	R	Q	E	E	E	V	V	A	R
Template Known Secondary structure																									T	T	T	B				S				T	T							S	S		B			B		S	S										T	T	.	.									T	T
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		366	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		Y	G	Y	N	Q	S	.	.	A	L	V	S	V	G	S	Q	V	R	A	G	Q	P	I	A	L	V
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		Y	F	L	P	A	G	M	T	P	L	V	V	E	G	E	I	V	E	V	G	Q	P	L	A	E	G
Template Known Secondary structure												S		T	T					T	T		B
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions