Job Description P37690 Confidence 35.93% Date Thu Jan 5 11:57:02 GMT 2012 Rank 222 Aligned Residues 71 % Identity 15% Template c1uw7A_ PDB info PDB header:replicase protein Chain: A: PDB Molecule:nsp9; PDBTitle: nsp9 protein from sars-coronavirus. Resolution 2.8 Å

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		322	.	.	.	.	.	.	.	330	.	.	.	.					.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370						.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure															.	.	.	.																.																						.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.																.																						.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	V	I	G	A	S	E	G	T	E	V	K	.	.	.	.	A	I	A	D	G	R	V	I	L	A	D	W	L	Q	G	.	Y	G	L	V	V	V	V	E	H	G	K	G	D	M	S	L	Y	G	Y	N	Q	.	.	.	.	.	S	A	L	V	S	V	G	S	Q	V	R	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.																.																						.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																.																						.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	T	Q	T	A	C	T	D	D	N	A	L	A	Y	Y	N	N	S	K	G	G	R	F	V	L	A	L	L	S	D	H	Q	D	L	K	W	A	R	F	P	K	S	D	G	T	G	T	I	Y	T	E	L	E	P	P	C	R	F	V	T	D	T	P	K	G	P	K	V	K	Y	L	Y	F	I	K	G	L	N	N
Template Known Secondary structure		B	S	S	S	T	T			S											S	S	S									S		S										T	T	S	S							B											T	T	S									B	T	T
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
				382	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	G	Q	P	I	A	L	V	G	S	S
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		L	N	R	G	M	V	L	G	S	L	A	A	T
Template Known Secondary structure											S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions