Job Description P37690 Confidence 35.77% Date Thu Jan 5 11:57:02 GMT 2012 Rank 224 Aligned Residues 203 % Identity 15% Template c1u5pA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:spectrin alpha chain, brain; PDBTitle: crystal structure of repeats 15 and 16 of chicken brain2 alpha spectrin Resolution 2.00 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		Q	L	K	S	I	Q	A	D	I	A	A	K	E	R	A	V	R	Q	K	Q	Q	Q	R	A	S	.	.	.	.	.	L	L	A	Q	L	K	K	Q	E	E	A	I	S	E	A	T	R	K	L	R	E	T	Q	N	T	L	N	Q	L	N	K	Q	I	D	E	M	N	A	S	I	A	K	L	E	Q	Q	K	A	A	Q
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.
Template Conservation
Template Sequence		K	Q	Q	N	F	N	T	G	I	K	D	F	D	F	W	L	S	E	V	E	A	L	L	A	S	E	D	Y	G	K	D	L	A	S	V	N	N	L	L	K	K	H	Q	L	L	E	A	D	I	S	A	H	E	D	R	L	K	D	L	N	S	Q	A	D	S	L	M	T	S	S	A	F	D	T	S	Q	V	K	D	K
Template Known Secondary structure																									T						S	S																																					T		S	S	S		T
Template Predicted Secondary structure
Template SS confidence
		1664	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	S	L	A	A	Q	L	D	A	A	F	R	Q	G	E	H	T	G	I	Q	L	I	L	S	G	E	E	S	Q	R	G	Q	R	L	Q	A	Y	F	G	Y	L	N	Q	A	R	Q	E	T	I	A	Q	L	K	Q	T	R	E	E	V	A	M	Q	R	A	E	L	E	E	K	Q	S	E	Q	Q	T	L	L	Y	E
Query Conservation
Alig confidence																								.	.	.	.																														.	.
Template Conservation																								.	.	.	.																														.	.
Template Sequence		R	E	T	I	N	G	R	F	Q	R	I	K	S	M	A	A	A	R	R	A	K	L	.	.	.	.	N	E	S	H	R	L	H	Q	F	F	R	D	M	D	D	E	E	S	W	I	K	E	K	K	L	L	V	S	S	.	.	E	D	Y	G	R	D	L	T	G	V	Q	N	L	R	K	K	H	K	R	L	E	A	E
Template Known Secondary structure																								.	.	.	.																												T		.	.					S	S
Template Predicted Secondary structure																								.	.	.	.																														.	.
Template SS confidence
		1744	.	.	.	.	.	1750	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.					.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.			.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	A	Q	Q	A	K	L	T	Q	A	L	N	E	R	K	K	T	L	A	G	L	E	S	S	I	Q	Q	G	Q	Q	Q	L	S	E	L	R	A	N	E	S	R	L	R	N	S	I	A	R	A	E	A	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	A	H	E	P	A	I	Q	G	V	L	D	T	G	K	K	L	S	D	D	N	T	I	G	K	E	E	I	Q	Q	R	L	A	Q	F	V	D	H	W	K	E	L	K	Q	L	A	A	A	R	G	Q	R	L
Template Known Secondary structure																						T		S	S		S																												T
Template Predicted Secondary structure
Template SS confidence
		1818	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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