 |
Job Description | P37690 | Confidence | 34.15% | Date | Thu Jan 5 11:57:02 GMT 2012 |
Rank | 231 | Aligned Residues | 73 |
% Identity | 18% | Template | c1ihgA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:cyclophilin 40; |
PDBTitle: bovine cyclophilin 40, monoclinic form
|
Resolution | 1.80 Å |
|
 |
  |   |
330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | T | E | V | K | A | I | A | D | G | R | V | I | L | A | D | W | L | Q | G | Y | G | L | V | V | V | V | E | H | G | K | G | D | M | S | L | Y | G | Y | N | Q | S | A | L | V | S | V | G | S | Q | V | R | A | G | Q | P | I | A | L | V | G | S | S | G | G | Q | G | R | P | S | L | Y | F | E | I | R | R | Q | G | Q |
Query Conservation |   |
|   |   |
|   |
|   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |
|   |   |
|
|
|   |
|
|   |   |   |   |
|
|
|   |   |
|   |   |
|   |
|   |   |
|
|   |
|   |   |
|
|   |
|
|   |
|
|   |
|
|   |
|   |
|   |   |
|
|
|
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |
|   |
|
|   |   |   |   |   |
|
|   |
|   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
| . |   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|
|   |
| . | . | . | . | . | . | . |
Template Sequence |   |
G | C | P | F | H | R | I | I | K | K | F | M | I | Q | G | G | D | F | S | N | Q | N | . |
. |
. |
. |
. |
. |
. |
G | T | G | G | E | S | I | Y | G | E | K | F | E | D | E | N | F | H | Y | K | H | D | K | E | G | . |
L | L | S | M | A | N | A | G | S | N | T | N | G | S | Q | F | F | I | . |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
T |
| B |  |  |  |  |  | T | T | T |  |  |  |  |
|
| T | T | T | S | S | . | . | . | . | . | . | . | S | S |
|
|
| B | T | T | B | S |
| B |
|
|
|
|
|
| B |
|
|
| S | T | T | . |  |  |  |  |
|
| S | S | T | T |
| B |
| S |
|  |  |  | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
|
|
|
  |
  |   |
410 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | N | P | Q | P | W | L |
Query Conservation |   |
  |
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |
|
Template Sequence |   |
T | T | V | P | T | P | H | L |
Template Known Secondary structure |   |
 | S | S |
|
| G | G | G |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
135 | . | . | . | . | 140 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|