Job Description P37690 Confidence 93.87% Date Thu Jan 5 11:57:02 GMT 2012 Rank 47 Aligned Residues 258 % Identity 10% Template c1f5nA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: human guanylate binding protein-1 in complex with the gtp2 analogue, gmppnp. Resolution 1.70 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	A	I	R	P	I	I	Y	A	S	V	L	S	A	G	V	L	L	C	A	F	S	A	H	A	D	E	R	D	Q	L	K	S	I	Q	A	D	I	A	A	K	E	R	A	V	R	Q	K	Q	Q	Q	R	A	S	L	L	A	Q	L	K	K	Q	E	E	A	I	S	E	A	T	R	K	L	R	E	T	Q	N	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	L	E	S	L	V	L	T	Y	V	N	A	I	S	S	G	D	L	P	C	M	E	N	A	V	L	A	L	A	Q	I	E	N	S	A	A	V	Q	K	A	I	A	H	Y	E	Q	Q	M	G	Q	K	V	Q	L	P	T	E	S	L	Q	E	L	L	D	L	H	R	D	S	E	R	E	A	I	E	V	F	I	R
Template Known Secondary structure																		T	S			B																																		S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	Q	L	N	K	Q	I	D	E	M	N	A	S	I	A	K	L	E	Q	Q	K	A	A	Q	E	R	S	L	A	A	Q	L	D	A	A	F	R	Q	G	E	H	T	G	I	Q	L	I	L	S	G	E	E	S	Q	R	G	Q	R	L	Q	A	Y	F	G	Y	L	N	Q	A	R	Q	E	T	I	A	Q	L	K	Q
Query Conservation
Alig confidence																																																.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		S	S	F	K	D	V	D	H	L	F	Q	K	E	L	A	A	Q	L	E	K	K	R	D	D	F	C	K	Q	N	Q	E	A	S	S	D	R	C	S	G	L	L	Q	V	I	F	S	.	.	.	.	.	P	L	E	E	E	V	K	A	G	I	Y	S	K	P	G	G	Y	R	L	F	V	Q	K	L	Q	D	L	K	K
Template Known Secondary structure							G	G	G																																							.	.	.	.	.								T	T	T	T	S	S	T	T
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.						.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	E	E	V	A	M	Q	R	A	E	L	E	E	K	Q	S	E	Q	Q	T	L	L	Y	E	Q	R	A	Q	Q	A	K	L	T	Q	A	L	N	E	R	K	K	T	L	A	G	L	E	S	S	I	Q	Q	G	Q	Q	Q	L	S	E	L	R	A	N	E	S	R	L	R	N	S	I	A	R	A	E	A	A	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	Y	E	E	P	R	K	G	I	Q	A	E	E	I	L	Q	T	Y	L	K	S	K	E	S	M	T	D	A	I	L	Q	T	D	Q	T	L	T	E	K	E	K	E	I	E	V	E	R	V	K	A	E	S	A	Q	A	S	A	K	M	L	H	E	M	Q	R	K	N	E	Q	M	M	E	Q	K	E	R	S	Y	Q
Template Known Secondary structure						S	S				T	T												T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	A	E	R	E	A	R	E	A	Q	A	V	R	D	R	Q	K	E	A	T	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	L	K	Q	L	T	E	K	M	E	N	D	R	V	Q	L	L	K	E	Q	E	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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