Job Description P0A6D7 Confidence 99.93% Date Thu Jan 5 11:02:54 GMT 2012 Rank 1 Aligned Residues 167 % Identity 44% Template c3trfB_ PDB info PDB header:transferase Chain: B: PDB Molecule:shikimate kinase; PDBTitle: structure of a shikimate kinase (arok) from coxiella burnetii Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	I	F	L	V	G	P	M	G	A	G	K	S	T	I	G	R	Q	L	A	Q	Q	L	N	M	E	F	Y	D	S	D	Q	E	I	E	K	R	T	G	A	D	V	G	W	V	F	D	L	E	G	E	E	G	F	R	D	R	E	E	K	V	I	N	E	L	T	E	K	Q	G	I	V	L	A	T	G	G	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	I	Y	L	I	G	L	M	G	A	G	K	T	S	V	G	S	Q	L	A	K	L	T	K	R	I	L	Y	D	S	D	K	E	I	E	K	R	T	G	A	D	I	A	W	I	F	E	M	E	G	E	A	G	F	R	R	R	E	R	E	M	I	E	A	L	C	K	L	D	N	I	I	L	A	T	G	G	G	V
Template Known Secondary structure									S	T	T	S	S											T	T																T	S																												S	S	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		V	K	S	R	E	T	R	N	R	L	S	A	R	G	V	V	V	Y	L	E	T	T	I	E	K	Q	L	A	R	T	Q	R	D	K	K	R	P	.	L	L	H	V	E	T	P	P	R	E	V	L	E	A	L	A	N	E	R	N	P	L	Y	E	E	I	A	D	V	T	I	R	T	D	D	Q	S	A	K	V	V	A
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		V	L	D	E	K	N	R	Q	Q	I	S	E	T	G	V	V	I	Y	L	T	A	S	I	D	T	Q	L	K	R	I	G	Q	K	G	E	M	R	R	P	L	F	I	K	N	N	S	K	E	K	L	Q	Q	L	N	E	I	R	K	P	L	Y	Q	A	M	A	D	L	V	Y	P	T	D	D	L	N	P	R	Q	L	A
Template Known Secondary structure		G	G	S																															T	T		S	S																												S						T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		164	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	I	I	H	M	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	I	L	V	D	I	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions